Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01597 ATGACCAACGACAACATCGCCGTGACAGATCTCACTTCTGGTTCGCATCTCCTTCTTCTTACACTTCATTCTTTTCTTTCTTTTTCTCAATCTTCTTTTTGCTTCCCTCTATGTGCAGCCCTCAATGAAGAGAATCGCGCCGACCTAGTCAATGCTCTCAAGAGCAAGATTCAGAGTCTGGCTGGGGCGCATTCTGATGTTCTAGAGACTCTATCCCCGAATGTCAGGAAGCGTGTTGAATCTCTTAGAGAAATTCAGGGTAAACATGATGAACTAGAGGCAGACTTCTTGAAGGAGAGAGAAGCTCTTGAAGCAAAGTACCAAAAACTGTATCAGCCATTGTACACAAAGCGCTATGAAATTGTAAATGGTGTTACTGAAGTGGAAGGGGCAGCAAATGAATCAACAGATGAATCAGAAGAGAATAAAGAGAAAGGAGTGCCTTCTTTTTGGCTCAATGCAATGAAAAATAATGATGTGTTAGCTGAAGAGATTTCAGAGCGTGATGAAGGTGCTCTCAAGTTTCTTAAAGATATCAAGTGGAGCAGGATAGAAAATCCTAAAGGGTTCAAGCTTGATTTCTTCTTTGATACCAATCCTTACTTTTCAAATACCGTCTTGACAAAAACATATCATATGATTGATGAGGATGAACCTATATTGGAGAAAGCAATTGGGACGGAAATTGAATGGTACCCGGGAAAATGCTTGACTCAGAAGGTTTTGAAGAAGAAGCCTAAGAAGGGTTCAAAGAATGCTAAACCAATTACCAAAACTGAAAGCTGTGAAAGCTTCTTCAATTTTTTCAAACCACCAGAAGTCCCTGAAGATGATGCTGACATTGATGAAGATTTGGCTGAAGAACTTCAGAATCAGATGGAACAAGATTATGACATTGGGTCAACATTAAGAGATAAAATTATCCCTCATGCTGTATCATGGTTTACTGGGGAGGCCGCTCAGGGAGATGAGTTTGAAGACCTGgaggatgatgaggacgaagaggaagatgaggacgaagatgaggacgaagaggatgacgaggacgaagacgatgaagaggaggatgacACTAAGACTAAAAAGAAGAAGAGTGGTAAGGCACAGGCTGGTGATGGTGATGGTGAGCGACCTCCAGAGTGCAAGCAGCAGTAA 1155 0.381 MTNDNIAVTDLTSGSHLLLLTLHSFLSFSQSSFCFPLCAALNEENRADLVNALKSKIQSLAGAHSDVLETLSPNVRKRVESLREIQGKHDELEADFLKEREALEAKYQKLYQPLYTKRYEIVNGVTEVEGAANESTDESEENKEKGVPSFWLNAMKNNDVLAEEISERDEGALKFLKDIKWSRIENPKGFKLDFFFDTNPYFSNTVLTKTYHMIDEDEPILEKAIGTEIEWYPGKCLTQKVLKKKPKKGSKNAKPITKTESCESFFNFFKPPEVPEDDADIDEDLAEELQNQMEQDYDIGSTLRDKIIPHAVSWFTGEAAQGDEFEDLEDDEDEEEDEDEDEDEEDDEDEDDEEEDDTKTKKKKSGKAQAGDGDGERPPECKQQ 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01597 384 Pfam Nucleosome assembly protein (NAP) 77 318 IPR002164 GO:0005634|GO:0006334
Gma15g01597 384 MobiDBLite consensus disorder prediction 316 384 - -
Gma15g01597 384 Coils Coil 325 345 - -
Gma15g01597 384 MobiDBLite consensus disorder prediction 356 384 - -
Gma15g01597 384 MobiDBLite consensus disorder prediction 322 355 - -
Gma15g01597 384 Gene3D - 69 128 - -
Gma15g01597 384 PANTHER NUCLEOSOME ASSEMBLY PROTEIN 1,2 37 384 - -
Gma15g01597 384 Gene3D Nucleosome assembly protein 142 318 - -
Gma15g01597 384 SUPERFAMILY NAP-like 54 317 IPR037231 -
Gma15g01597 384 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 37 384 IPR002164 GO:0005634|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01597 Gma-Chr15 15694760 15697791 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01597 K11279 - gmx:547812 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01597 15 15694760 15697791 Gma09g00584 09 6385048 6388644 GST
Gma17g00508 17 4180130 4182882 Gma15g01597 15 15694760 15697791 PCT
Gma13g00855 13 22802553 22805771 Gma15g01597 15 15694760 15697791 PCT
Gma15g01597 15 15694760 15697791 Gma17g00508 17 4180130 4182882 PCT
Gma15g01597 15 15694760 15697791 Gma13g00855 13 22802553 22805771 PCT