Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00481 ATGCACGAGAGATCGATGAAAGAAGCTGCTGGCACGTGCCCACAAAGGAGAAGAACCCCTTCCTTCTCCTCTTCTCTTCTCGACGCCATTTACCGCTCCATTGACGAATCAAAATCCAACCTTCACGACGATCAACAACTGGGTCACCACCACCACCACGATCAAACCTTAGCCACACACAGTTTCACCTCTGAAGAAAAAGGTGGCAAAAAGGAGAGAATGAATCTTCGCCGAGCAGTGATGTTGGAAGATTGGATGGAGAAGTATGGTTCTTCCCGTTCCCTCAATGCTCAGTTGCTAAACTCGAGTTCAAGCTCCTCAGAATGCAGCTCTGCAGGGGGAATATTCTCCTCTTCAGAAACAGACACGACAACAACAACCTTGAAGAAACAAAGACCAGCAAGGCCCACATCGGagaagaagaagaagaagaagaagaagCAGGACCATATAATGAGTTCAGAAAAAAAGAACAAAGAAGGTGGTTTTGCAAGGACCAAGTTGAGGGCGTTGAAAATTTACGGTGAATTGAACCAGAGAGTGAAGCAACCCATTTCACCAGGGAGTAGAATAGCTAGCTTCCTTAGCTCCATCTTCAACTCACAGAACGTGAAGAAAGCCAAAATGTGTTACGTTGGAGCCGTTGAAGATGTTAGCTTCGAGCACAAATCAAAGTCCCCTTGTTTCTCTTCCACGCCTTCTTCGTTTTCTAGAAGGTCTTGCATGAGCAAAACACCCTCTTCGGCTAAAAAACCCAACAACAATGGAGTCAAAAGATCCGTGAGGTTTTACCCCGTTAGCGTAATCCTAGGTGAGGATTCTGAACCGCAATCTAATAGTCATAGTCATAATAAGAAATGTAACAACATTTATGAGAGTGAATCTAATCTCACTGTGAGAAAGATTACTAGAAGTTCTTCCATAAAGGAGCTGAAGAAGAACACTGTTCGGGGAAAAGAAAATGCAACCGAAGAAGCAGCAGCTAGGGGTTTTGTAAAAGGTTACCGAAATTCTGGTAAGGGTGAATTTGATTTTATAGGTTTTTATGGTAATGGTGAGAATGAGAATGATGAAAATGATGATGATGATGATGTGAGTTGTTCAAGTTCAGATTTGTTTGAGCTGGATCATCTTATTGGAGCTGCAAGGTACCAAGAAGAGCTTCCTGTCTATGAAACTACCAATTTGGAAACAAATAAAGCCATTGCTAGTGGTCTATGTTTGTAG 1227 0.4205 MHERSMKEAAGTCPQRRRTPSFSSSLLDAIYRSIDESKSNLHDDQQLGHHHHHDQTLATHSFTSEEKGGKKERMNLRRAVMLEDWMEKYGSSRSLNAQLLNSSSSSSECSSAGGIFSSSETDTTTTTLKKQRPARPTSEKKKKKKKKQDHIMSSEKKNKEGGFARTKLRALKIYGELNQRVKQPISPGSRIASFLSSIFNSQNVKKAKMCYVGAVEDVSFEHKSKSPCFSSTPSSFSRRSCMSKTPSSAKKPNNNGVKRSVRFYPVSVILGEDSEPQSNSHSHNKKCNNIYESESNLTVRKITRSSSIKELKKNTVRGKENATEEAAARGFVKGYRNSGKGEFDFIGFYGNGENENDENDDDDDVSCSSSDLFELDHLIGAARYQEELPVYETTNLETNKAIASGLCL 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00481 408 PANTHER PROTEIN BIG GRAIN 1-LIKE A 1 408 - -
Gma17g00481 408 MobiDBLite consensus disorder prediction 229 255 - -
Gma17g00481 408 MobiDBLite consensus disorder prediction 229 257 - -
Gma17g00481 408 MobiDBLite consensus disorder prediction 103 132 - -
Gma17g00481 408 MobiDBLite consensus disorder prediction 1 21 - -
Gma17g00481 408 MobiDBLite consensus disorder prediction 103 162 - -
Gma17g00481 408 MobiDBLite consensus disorder prediction 41 73 - -
Gma17g00481 408 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 1 408 IPR039621 GO:0009734
Gma17g00481 408 MobiDBLite consensus disorder prediction 135 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00481 Gma-Chr17 3958381 3959719 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00481 - - gmx:100803228 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00481 17 3958381 3959719 Gma07g00341 07 3060160 3061840 ECH
Gma17g00481 17 3958381 3959719 Gma14g00899 14 10079301 10080518 ECH
Gma17g00481 17 3958381 3959719 Gma17g02150 17 39026866 39028259 ECH
Gma17g00481 17 3958381 3959719 Gma04g00508 04 4517504 4518688 ECH
Gma17g00481 17 3958381 3959719 Gma06g00497 06 4243756 4245308 ECH
Gma17g00481 17 3958381 3959719 Gma17g00481 17 3958381 3959719 ECH
Gma17g00481 17 3958381 3959719 Gma13g00885 13 23066630 23067806 GST