Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00885 ATGCACGAGAGATCGATGAAAGAAGCTGCTGGCACGTGCCCACAAAGGAGAAGAACCCCTTCCTTCTCCTCTTCTCTTCTCGACGCCATTTACCGTTCCATCGACGAATCAAAATCCAACCTTCACGACGATCAACAACTGGGTCTCCACCACCACGATCAAACCACACACAGTTTCACCTCTGAAAAAGGTGGCAAAAAAGAAAGAATGAATCTTCGCCGAGCCGTGATGTTGGAAGATTGGATGGAGAAGCACGGTTCCCATTCCCTCAATGCTCAGTTGCTAAACTCGAGTTCAAGCTCCTCAGAATGCAGCTCTGCAGGGGGCATATTCTCCTCTTCAGAAACAGACACAACAACAACCCTAACGTTGAAGAAACAAAGACCAGCAAGGCTCACATCGGAGAAGAAGAAGAAGAAGCAGGACCGTATTATGAGTTCAGAAAAGCAGAACAAAGAAAGTGGTTTTACAAGGACCAAGTTGAGGGCGTTGAAAATTTACGGCGAATTGAACCAGAGAGTGAAGCAACCCATTTCACCGGGGAGTAGAATAGCTAGCTTCCTTAGCTCCATCTTCAACTCACAGAACGTGAAGAAAGCCAAAATGTGTTACGCTGGAGCCGTTGAAGATGTAAGCTTCGAGCACAAATCAAATTCCCCTTGTTTCTCTTCCATCCCCTCTTCCTTTTCTAGAAGGTCTTGCATGAGCAAAACACCCTCTTCGGCTAAAAAATCCAACAACAACGAAGTCAAAAGATCCGTGAGGTTTTACCCCGTTAGCGTAATCCTAGGTGAGGATTCTGAACCACAATCTAGTTATCATAAATGTAACATCATTTACGAGAGTGAACCTAATCTTGGTGTGAGAAGTTCTTCCATAAAGGAGCTGAAGAAGAACACTGCTCGGGGAAATGAAAATGGAGCTGAAGAAGCAGCAGCGCGTGGTTTTGTAAAAGGTTATCGAAATTCTGGTCAGGGTGAATTTGATTTTAGAGGTTTTTatgatgatgatgatgaagatgatgatgatgatgTGAGTTGTTCAAGTTCAGATTTGTTTGAGCTGGATCATCTTATTGGAGCTGCAAGGTACCAAGAAGAGCTTCCTGTCTATGAAACTACCAATTTGGAAACAAATAAAGCCATTGCTAGTGGTCTATGTTTGTAG 1167 0.4284 MHERSMKEAAGTCPQRRRTPSFSSSLLDAIYRSIDESKSNLHDDQQLGLHHHDQTTHSFTSEKGGKKERMNLRRAVMLEDWMEKHGSHSLNAQLLNSSSSSSECSSAGGIFSSSETDTTTTLTLKKQRPARLTSEKKKKKQDRIMSSEKQNKESGFTRTKLRALKIYGELNQRVKQPISPGSRIASFLSSIFNSQNVKKAKMCYAGAVEDVSFEHKSNSPCFSSIPSSFSRRSCMSKTPSSAKKSNNNEVKRSVRFYPVSVILGEDSEPQSSYHKCNIIYESEPNLGVRSSSIKELKKNTARGNENGAEEAAARGFVKGYRNSGQGEFDFRGFYDDDDEDDDDDVSCSSSDLFELDHLIGAARYQEELPVYETTNLETNKAIASGLCL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00885 388 MobiDBLite consensus disorder prediction 106 128 - -
Gma13g00885 388 MobiDBLite consensus disorder prediction 49 69 - -
Gma13g00885 388 MobiDBLite consensus disorder prediction 1 21 - -
Gma13g00885 388 MobiDBLite consensus disorder prediction 135 156 - -
Gma13g00885 388 MobiDBLite consensus disorder prediction 106 156 - -
Gma13g00885 388 PANTHER PROTEIN BIG GRAIN 1-LIKE A 1 388 - -
Gma13g00885 388 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 1 388 IPR039621 GO:0009734
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00885 Gma-Chr13 23066630 23067806 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00885 - - gmx:100779754 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00885 13 23066630 23067806 Gma07g00341 07 3060160 3061840 ECH
Gma13g00885 13 23066630 23067806 Gma14g00899 14 10079301 10080518 ECH
Gma13g00885 13 23066630 23067806 Gma17g02150 17 39026866 39028259 ECH
Gma13g00885 13 23066630 23067806 Gma04g00508 04 4517504 4518688 ECH
Gma13g00885 13 23066630 23067806 Gma06g00497 06 4243756 4245308 ECH
Gma13g00885 13 23066630 23067806 Gma13g00885 13 23066630 23067806 ECH
Gma17g00481 17 3958381 3959719 Gma13g00885 13 23066630 23067806 GST