Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00471 ATGACTGGAATTTCAAAGGAAGAAGGGTCAGCTAGTCCAAGTTGGGGTGCTTCATTTTTTATGCAGACAAGAGAGGAAGTGGCTAGAGCTGTTGCAGCTGCTGTTAACCCTCCAATGTCGTCAAAAGATGATAATAGTGGTAGCCAACTTCAAAGGCTGCAGTATCAAGTTGCAAAAATGTTAAAAGGCTTTTCTCACCCTCCTGATGTTGAAACAACAAATTACAATCCTGAAATCCTGACTAGTCTGAAGCGTCAATGGGCTGCAAACTTTCAGTTGCAGTACATGGACCATAGGTCTTGGAAGGAACCTTCACGACTGTTTGAAAGCATGGTGGTTGTTGGACTTCCTCCTAATTGTGATGTTCAGGCACTGCAAAGGAAATATGTTGATAGAAAGTTTGAAGGCTCTGGTAAATTGAGAAGTGCACTCGGTTATCAGAATCAATCTCGTGTAGAACCCAATATTGAACCTCAGGTTGTCTTATTTGTTTACCCTCCAGAAAAACAGCTGCCTCTTAAGTGCAAGGATCTTCTTTCTTTCTGCTTCCCTGGAGGCTTAGAGGTCCGTGCTGTTGAGAGAACCCCTTCCATGAGTGAGTTGAATGAAATTCTTTATGGGCAGGAACACCTTAAACAAAGGGATCTGTCATTTGTATTCAGGTTACAGGGTGCTGACAACTCAACACTTTATGGGTGTTGTGTCTTAGTTGAAGAACTAGTGCAAAAGCCCTCTGGATTGCTTTCTCTGATTTCTGATAAGCAGCCTTCTTACTCGTCTTTGAGACGGCATATATTAACCACTCAGAGATGTTACTGCATACTTTCAAGGCTCCCAGCTTTTGATTTGCTCTTTGGTGTATTGAATAGCATCTTCACACAAGAAAGGCTAGAGCGTTTGACAAAAGGTGTTGGAGATTTAAATTTAGAATTTGATGAAGGTAACCATAAGGAAGAAAACCTAGAGGGCTACTCAGACAGTGTTTTGGTGAGTGATGAACCAATAGAAGACAGACTTGGTGGAAATATGGTAATTTCTCAATCAAGAGTAGGAAAGTCTACACCTGAAAATATTGTGGATGATGGTCAACCAGAGCATCTAATGGTTGATGGGGAGCTGCAGCCTTATAAGGAGAGAATCAATTATGATGATGTCTTGCTTACTGATCCTGTAAATGATAGGACAACAGCCAAAGAAGATTCTGGCCCTGCAAATTCTGAAAATAGTGATCACTATGGAGATGCTTTTGGAACCAACAAACAATCAGAAGACAAACATTTACCTAATGCTATTTTGCCCCTCCTGCGCTATTGCCAGTATGAAAGCTCTGAATCTTCCTGCAGTTTTCAAGGCTCGCCTTGTGAAGACCGAAATTTTAGGAGTGATGTTGATGATAATGAGACAGAAGAAGCATCTTTCTCCGGCCAAGAGGATTTAAACGACTTAAATGATATTCTTGAATGGGCCAAGGAAAATAACCACGGACCACTACAAATTGTAAGCGAGTTTTACCGTTTAAGTTGCCCTGCCAGGGGCTCATCACTTACATTTCATCCTTTGGAGCACTTGCATCCCTTGGAATATCACAGATCAGCTGAGACAGTTCTACGTCTTGCTGGTTCAACAGTTGATTTGAAAACGTCAAGTACTGGTCTGGGATTAGCTGATGCACACATTGCTCTTCTGGTGGAAGAGGCAAATGCATTATCTGTATGGGCTGTAGCTTGCTTGTGCGGTACATTGAGACTTGAAAATGTGTTAACATTCTTTGCAGGAGTTCTACTAGAGAAGCAGATAGTTGTTGTCTGTTCTAATTTGGGAATCCTATCTGCTTCAATTTTATCAGTTATTCCACTAATCCAGCCTTACCGGTGGCAAAGCCTGCTAATGCCAGTTTTACCAAATGACATGCTTGAGTTTTTAGATGCACCTGTCCCTTATGTAGTCGGTATTAAGAACAAGACCAGTGAACTTCAGTCAAAGTTTACCAATGTTATTCTGGTTGATGCTGATAGAAACCAGGTGAAGTCACCAACAATACCCCAACTGCCAAGACAGAAAGAGCTAGTCTCTTCTTTACGTCCTTATCATGCAACTCTTGTAGGAGAAAGTTACTTGGGTAGGAGAAGACCAGTATATGAATGCACAGAAGTGCAGATTGAAGCTGCGAAGGGGTTCCTTTCAGTGTTAAGATCTTACTTGGATTCTCTTTGCTATAACATCCGTTCTCACACAATCACCAATGTACAATCCAATGATGATAAGGTATCATTGCTTCTGAAGGAGAGTTTCATTGAGTCGTTCCCATATCGTGATCAGCCTTTTATGAAGCTTTTCGTGGATACACAGCTTTTTTCTGTACATACAGACCTTGTTCTTTCTTTCTTACAAAAGGAATAG 2400 0.4129 MTGISKEEGSASPSWGASFFMQTREEVARAVAAAVNPPMSSKDDNSGSQLQRLQYQVAKMLKGFSHPPDVETTNYNPEILTSLKRQWAANFQLQYMDHRSWKEPSRLFESMVVVGLPPNCDVQALQRKYVDRKFEGSGKLRSALGYQNQSRVEPNIEPQVVLFVYPPEKQLPLKCKDLLSFCFPGGLEVRAVERTPSMSELNEILYGQEHLKQRDLSFVFRLQGADNSTLYGCCVLVEELVQKPSGLLSLISDKQPSYSSLRRHILTTQRCYCILSRLPAFDLLFGVLNSIFTQERLERLTKGVGDLNLEFDEGNHKEENLEGYSDSVLVSDEPIEDRLGGNMVISQSRVGKSTPENIVDDGQPEHLMVDGELQPYKERINYDDVLLTDPVNDRTTAKEDSGPANSENSDHYGDAFGTNKQSEDKHLPNAILPLLRYCQYESSESSCSFQGSPCEDRNFRSDVDDNETEEASFSGQEDLNDLNDILEWAKENNHGPLQIVSEFYRLSCPARGSSLTFHPLEHLHPLEYHRSAETVLRLAGSTVDLKTSSTGLGLADAHIALLVEEANALSVWAVACLCGTLRLENVLTFFAGVLLEKQIVVVCSNLGILSASILSVIPLIQPYRWQSLLMPVLPNDMLEFLDAPVPYVVGIKNKTSELQSKFTNVILVDADRNQVKSPTIPQLPRQKELVSSLRPYHATLVGESYLGRRRPVYECTEVQIEAAKGFLSVLRSYLDSLCYNIRSHTITNVQSNDDKVSLLLKESFIESFPYRDQPFMKLFVDTQLFSVHTDLVLSFLQKE 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00471 799 ProSiteProfiles Tripartite DENN domain profile. 143 799 IPR037516 -
Gma17g00471 799 Gene3D - 95 303 - -
Gma17g00471 799 Pfam uDENN domain 161 236 IPR005113 -
Gma17g00471 799 MobiDBLite consensus disorder prediction 393 423 - -
Gma17g00471 799 SMART DENN_cls 267 673 IPR001194 -
Gma17g00471 799 PANTHER DENN (AEX-3) DOMAIN PROTEIN 1 799 - -
Gma17g00471 799 SMART uDENN_cls 104 238 IPR005113 -
Gma17g00471 799 MobiDBLite consensus disorder prediction 398 416 - -
Gma17g00471 799 Gene3D - 569 735 IPR043153 -
Gma17g00471 799 Pfam DENN (AEX-3) domain 559 673 IPR001194 -
Gma17g00471 799 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 1 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00471 Gma-Chr17 3877773 3889087 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00471 - - gmx:100801645 1568.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00471 17 3877773 3889087 Gma17g00471 17 3877773 3889087 ECH
Gma17g00471 17 3877773 3889087 Gma13g00898 13 23140789 23152404 GST
Gma17g00471 17 3877773 3889087 Gma15g01647 15 17013799 17033315 PCT
Gma17g00471 17 3877773 3889087 Gma09g00630 09 7110836 7122094 PCT
Gma15g01647 15 17013799 17033315 Gma17g00471 17 3877773 3889087 PCT
Gma09g00630 09 7110836 7122094 Gma17g00471 17 3877773 3889087 PCT