Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00898 ATGACTGGAATGTCAAAGGAAGAAGGGTCAGCTGGTCCTAGTTGGGGTGCTTCATTTTTTATGCAGACAAGAGAGGATGTGGTTAGAGCTGTTGCAGCTGCTGTTAACTCTCCAATGTCATCAAAAGATGATAACACTGGTAGCCAACTTCAAAGGCTGCAGTATCATGTTGCAAAAATGTTAAAAGGTTTTTCACACCCTCCTAATGTTGAAAACACAAATTATAATCCTGAAATCCTGACTAGTCTGAAGCGTCAATGGGCTGCAAACTTTCAGTTGCAGTACATGGACCATAGGTCTTGGAAGGAGCCCTCACAACTGTTTGAGAGCATGGTGGTTGTTGGACTTCCTCCTAATTGTGATGTTCAGGCACTGCAAAGGCAATATGTTGATAGAAAGTTTGAAGGCTCTGGTAAATTGAGAAGTGCACTCGGTTATCAGAATCAATCTCGTGTAGAACCCAATATTGAACCTCAGGTTGTCTTATTTGTTTACCCTCCAGAAAAACAGCTGCCTCTTAAATGCAAGGATCTTATTTCTTTCTGCTTCCCTGGAGGCTTAGAGGTTTGTGCTGTTGAGAGAACCCCTTCCATGAGTGAGTTGAATGAAATTCTTTTTGGGCAGGAACACCTTAAACAAAGGGATCTGTCATTTGTATTCAGGTTACAGGGTGCTGAAAACTCAACACTTTATGGGTGTTGTGTCTTAGTTGAAGAACTAGTGCAAAAGCCCTCTGGATTGCTATCTCTGATTTCTGATAAGCAGCCTTCTTACTCGTCTTTGAGACGACATATATTAATCACTCAGAGATGTTACTGCATTCTTTCAAGGATCCCAGCTTTTGAATTGCACTTTGGTGTATTGAATAGCATCTTCACACAAGAAAGGCTAGAGCGGTTGACAAAAGGTGTTGGAGATTTAAATTTAGAATTTGATGAAGGTAACCATAAGGAAGAAAACCTACAGGGCTACTCGGAGAGTGTTTTGGTGAGTGATGGACCAATAGAAGACAGACTTGGTGGAAATACAGTAATTTCTCAATCAAGAGTGAGAAAGTCTACACCTGAAAATATTGTGGATGATGGTCAATCAGAGCATCTAACGGTTGATGGGGAGCTGCAGACATATAAGGAGAGAATCAATTATGACGATGCTTTGCTTACTGATCCTGTAAATGATAGGACAACAGCCAAAGAAGATTCTGGGCCTGCAAATTCCGAAAATAGTGATCACTATGGAGATGCTTTTGCAACCAACAAACAATCAGAAGACAAACATTTACCTAATGCTATTTTGCCCCTTCTGCGCTATTGCCAGTATGAAAGTTCTGAATCTTCCTGCAGTTTTCAAGGCTCGCCTTGTGAAGACAGAAATTTTAGGAGTGATGTTGATGATAATGAGACAGAGGAAGCATCTTTCTCTGGCCAAGAGGATTTAAATGACTTAAATGATATTCTTGAGTGGGCCAAGGAAAATAACCATGGACCACTACAAATTGTAAGCGAGTTTTACCGTTTAAGTTGCCCTGCCAGGGGCTCATCACTTACATTTCATCCTTTGGAGCACTTGCATCCCTTGGAATATCACAGATCAGCTGAGACAGTTCTACGTCTTGCTGATTCAACAGTTGATTTGAAAACGTCCAGTACTGGTCTGGGATTAGCTGATGCACACATTGCTCTTCTGGTGGAAGAGGCAAATGCATTATCTTTATGGGCTGTAGCTTGCTTGTGCGGTACATTGAGACTTGAAAATGTGTTAACATTCTTTGCAGGAGTTCTACTAGAGAAGCAGATAGTTGTTGTCTGTTCTAATTTGGGAATCCTATCTGCTTCAGTTTTATCAGTTATTCCGCTAATCCAGCCTTACCGGTGGCAAAGCCTGTTAATGCCAGTTTTACCAAATGACATGCTTGAGTTTTTAGATGCACCTGTCCCTTATGTAGTCGGTATTAAGAACAAGACCAGTGAAGTTCAGTCAAAGTTTACCAATGTTATTCTGGTTGATGCCGATAGAAACCTGGTGAAGTCACCAACAATTCCCCAACTGCCAAGACAGAAAGAGCTAGTCTCTTCTTTACGTCCTTATCATGAAACTCTTGTAGGAGAAAGTTACTTGGGTAGGAGAAGACCAGTATATGAATGCACAGAAGTGCAGATTGAAGCTGCGAAGGGGTTCCTTTCAGTGTTAAGATCTTACTTGGATTCTCTTTGCTGTAACATCCGTTCTCACACAATCACCAATGTACAATCCAATGACGATAAGGTATCATTGCTTCTGAAGGAGAGTTTCATTGACTCATTCCCATATCGTGATTGGCCTTTTATGAAGCTTTTCGTGGATACACAGCTTTTTTCTGTGTATACAGACCTTGTTCTCTCTTTCTTACAAAAGGAATAG 2400 0.4104 MTGMSKEEGSAGPSWGASFFMQTREDVVRAVAAAVNSPMSSKDDNTGSQLQRLQYHVAKMLKGFSHPPNVENTNYNPEILTSLKRQWAANFQLQYMDHRSWKEPSQLFESMVVVGLPPNCDVQALQRQYVDRKFEGSGKLRSALGYQNQSRVEPNIEPQVVLFVYPPEKQLPLKCKDLISFCFPGGLEVCAVERTPSMSELNEILFGQEHLKQRDLSFVFRLQGAENSTLYGCCVLVEELVQKPSGLLSLISDKQPSYSSLRRHILITQRCYCILSRIPAFELHFGVLNSIFTQERLERLTKGVGDLNLEFDEGNHKEENLQGYSESVLVSDGPIEDRLGGNTVISQSRVRKSTPENIVDDGQSEHLTVDGELQTYKERINYDDALLTDPVNDRTTAKEDSGPANSENSDHYGDAFATNKQSEDKHLPNAILPLLRYCQYESSESSCSFQGSPCEDRNFRSDVDDNETEEASFSGQEDLNDLNDILEWAKENNHGPLQIVSEFYRLSCPARGSSLTFHPLEHLHPLEYHRSAETVLRLADSTVDLKTSSTGLGLADAHIALLVEEANALSLWAVACLCGTLRLENVLTFFAGVLLEKQIVVVCSNLGILSASVLSVIPLIQPYRWQSLLMPVLPNDMLEFLDAPVPYVVGIKNKTSEVQSKFTNVILVDADRNLVKSPTIPQLPRQKELVSSLRPYHETLVGESYLGRRRPVYECTEVQIEAAKGFLSVLRSYLDSLCCNIRSHTITNVQSNDDKVSLLLKESFIDSFPYRDWPFMKLFVDTQLFSVYTDLVLSFLQKE 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00898 799 MobiDBLite consensus disorder prediction 387 421 - -
Gma13g00898 799 Pfam uDENN domain 161 236 IPR005113 -
Gma13g00898 799 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 1 799 - -
Gma13g00898 799 SMART uDENN_cls 104 238 IPR005113 -
Gma13g00898 799 MobiDBLite consensus disorder prediction 445 475 - -
Gma13g00898 799 MobiDBLite consensus disorder prediction 398 416 - -
Gma13g00898 799 Pfam DENN (AEX-3) domain 571 673 IPR001194 -
Gma13g00898 799 ProSiteProfiles Tripartite DENN domain profile. 143 799 IPR037516 -
Gma13g00898 799 Gene3D - 570 735 IPR043153 -
Gma13g00898 799 Gene3D - 95 303 - -
Gma13g00898 799 SMART DENN_cls 267 673 IPR001194 -
Gma13g00898 799 PANTHER DENN (AEX-3) DOMAIN PROTEIN 1 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00898 Gma-Chr13 23140789 23152404 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00898 - - gmx:100795172 1569.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00898 13 23140789 23152404 Gma13g00898 13 23140789 23152404 ECH
Gma17g00471 17 3877773 3889087 Gma13g00898 13 23140789 23152404 GST
Gma13g00898 13 23140789 23152404 Gma15g01647 15 17013799 17033315 PCT
Gma13g00898 13 23140789 23152404 Gma09g00630 09 7110836 7122094 PCT
Gma15g01647 15 17013799 17033315 Gma13g00898 13 23140789 23152404 PCT
Gma09g00630 09 7110836 7122094 Gma13g00898 13 23140789 23152404 PCT