Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00468 ATGGCGATATTCTCTGAATCGAATCACCATCACAACACTTCCGATGGGGTCTCCCAGCGAGTCAACAGTCCGCGTTTCTCCGGTCCAATGACTCGCCGCGCCCACTCCTTCAAACGTAACAACAGCAGCAACAATAGCAACAACACCGCCACCACCACCTCCCACGGCGGCGGCGGAGGCAGTGGCGGCGTCGAGATTGAGCTTCAAATCAACTCGCCCAGATCGGAGGAAGCGTCGGAGGGTGTGCCGGTGGGGAAGCACAGCCACCATCACGTGACCCAGAGAGTGCACGTGAGAGGGTTGCTGAAGAAGCCCCTTGCGTCCATCGTTGAGGATTTGGGGTTGAGAGAAAGGAAGAAAATTGGGCACTGGATGTTCTTAGTGTTCTGTGGGGTGTGCTTGTTCATGGGTGTTCTCAAGATATGTGCCACTGGTTGGCTTGGATCTGCTATTGAAATAACTCAATCCAATAAGGAACTATCTGACTCCATTCCTAGTCTAACTCTAATGGACAAAAGCTCCCTTGGTTATGCATATAGGGGGGGAGCAAGTGATGTTGAACGAACATTAAAAACAGTAGCAACAGGAGTAGACGGCAGCCATACTGCCATGACTGAAGATTCAGGGATCTGGTCCAAACCCAACAGTGACAATTTCACCAAATGCATAGATCTTCCAAGTAATCATAAAAAGCTAGATGCAAAGACCAATGGCTACATTTTTGTAAATGCAAATGGTGGCCTGAATCAGATGAGATTTGGGATATGTGATATGGTTGCTGTTGCTAAGATTGTGAAGGCTACACTTGTTCTTCCTTCTCTTGATCACACCTCCTACTGGGCTGATGACAGTGGCTTCAAGGATTTGTTTGATTGGAAGCATTTTATTAATATGCTGAAGGATGATGTCCACATAGTTGAGAAATTACCTCCCGCCTATGCTGGAATTGAGCCTTTCCCAAAAACTCCAATATCTTGGTCAAAGGTTCATTATTATAAGACTGAGGTTCTTCCCCTCCTAAAGCAGCACAAAGTGATGTATTTCACTCATACCGATTCCAGGCTTGATAACAATGACATTCCACGTTCCATACAGAAACTAAGATGCCGTGTAAATTACAGAGCATTGAAATATTCAGCTCCAATTGAAGAACTTGGAAACACACTGGTATCTAGAATGCAACAGAATGGAAATCCTTATCTTGCCCTTCATCTGAGATATGAGAAGGATATGCTTGCATTTACAGGCTGCAGTCACAATTTGACTGCAGAAGAAGATGAAGAAATGAGACAGATGCGATATGAAGTCAGTCACTGGAAGGAAAAGGAGATTAATGGGACCGAGAGGAGATTGCTTGGAGGTTGTCCATTAACTCCAAGGGAAACGTCCCTATTACTTAGAGCACTGGGTTTTCCATCACACACCAGGATTTTTCTGGTAGCTGGAGAAGCATATGGAAGAGGAAGTATGAAATATCTTGAGGATGATTTCCCCAACATTTTCTCTCATTCCTCTCTGTCCTCTGAAGAAGAGTTGAATCCTTTCAAGAATCATCAGAACATGTTGGCTGGTTTAGACTATGTTGTTGCCCTTAAGAGTGATGTATTTCTCTACACTTATGATGGAAATATGGCAAAGGCCGTACAAGGTCATAGGCGCTTTGAAGACTTCAAGAAAACCATCAATCCAGACAAGATGAATTTTGTTAAACTTGTTGATCAGTTGGATGAAGGAAAAATTTCATGGAAAAAGTTCAGCTCCAAGGTAAAAAAGCTTCACACAGATCGAATTGGTGCTCCATATCCAAGGGAGCCTGGAGAATTTCCAAAACTGGAGGAAAGTTTTTATGCAAATCCTCTGCCAGGATGTATTTGTGAAACAAGATAG 1887 0.4404 MAIFSESNHHHNTSDGVSQRVNSPRFSGPMTRRAHSFKRNNSSNNSNNTATTTSHGGGGGSGGVEIELQINSPRSEEASEGVPVGKHSHHHVTQRVHVRGLLKKPLASIVEDLGLRERKKIGHWMFLVFCGVCLFMGVLKICATGWLGSAIEITQSNKELSDSIPSLTLMDKSSLGYAYRGGASDVERTLKTVATGVDGSHTAMTEDSGIWSKPNSDNFTKCIDLPSNHKKLDAKTNGYIFVNANGGLNQMRFGICDMVAVAKIVKATLVLPSLDHTSYWADDSGFKDLFDWKHFINMLKDDVHIVEKLPPAYAGIEPFPKTPISWSKVHYYKTEVLPLLKQHKVMYFTHTDSRLDNNDIPRSIQKLRCRVNYRALKYSAPIEELGNTLVSRMQQNGNPYLALHLRYEKDMLAFTGCSHNLTAEEDEEMRQMRYEVSHWKEKEINGTERRLLGGCPLTPRETSLLLRALGFPSHTRIFLVAGEAYGRGSMKYLEDDFPNIFSHSSLSSEEELNPFKNHQNMLAGLDYVVALKSDVFLYTYDGNMAKAVQGHRRFEDFKKTINPDKMNFVKLVDQLDEGKISWKKFSSKVKKLHTDRIGAPYPREPGEFPKLEESFYANPLPGCICETR 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00468 628 CDD O-FucT_plant 239 560 IPR024709 -
Gma17g00468 628 MobiDBLite consensus disorder prediction 1 26 - -
Gma17g00468 628 PANTHER O-FUCOSYLTRANSFERASE 28 180 627 - -
Gma17g00468 628 Pfam GDP-fucose protein O-fucosyltransferase 239 554 IPR019378 -
Gma17g00468 628 MobiDBLite consensus disorder prediction 34 58 - -
Gma17g00468 628 PIRSF UCP009360 87 628 IPR024709 -
Gma17g00468 628 MobiDBLite consensus disorder prediction 1 66 - -
Gma17g00468 628 PANTHER OS02G0726500 PROTEIN-RELATED 180 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00468 Gma-Chr17 3852474 3858399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00468 167 625 Miscellaneous Gene Families AT2G37980 60.814 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00468 - - gmx:100801100 1246.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00468 17 3852474 3858399 Gma17g00468 17 3852474 3858399 ECH
Gma17g00468 17 3852474 3858399 Gma13g00901 13 23175469 23181135 GST
Gma17g00468 17 3852474 3858399 Gma15g01652 15 17094615 17099600 PCT
Gma17g00468 17 3852474 3858399 Gma09g00634 09 7178105 7193189 PCT
Gma15g01652 15 17094615 17099600 Gma17g00468 17 3852474 3858399 PCT
Gma09g00634 09 7178105 7193189 Gma17g00468 17 3852474 3858399 PCT