Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01652 ATGACACTAACTAACATGGCGCACAATAACATCAACTCCACCACCATGGATGGCGTGCCTCACCGAGTCAACAGCCCGCGTTACACCGGTTCGATGACTCGTCGAGCTCACTCATTCAAACGCAACAACAACAGCAATAATGAAATTGAGCTCCAAATAAACTCACCCAGATCACCCTTGGTTTCTGCTGAAGGCTCTGTTTTGAAAAGGAATCAGCATCATCATAAGGAGAAAAAGAACAAGTTTGGCCATTGGGTGTTCTTGCTCTTTTGTGGGGTATGCTTGTTTCTGGGTCTTCTCAAGATTTGTGCTTCTGCCTGGTGGTTCGGATCTAAAGTACACAGTACACACGAATCCATTATTCAGGAACTATCTGACTCCATCACTAGTCGAAATCTAATGGATCAAAGCTCCCATGGTTATGCATATAGGGAGGGAGCAAATGAGGTTGAACGAACTCTAAAGATGGTAACTACAGGGGTAATTGATAGCCAGGCTGGCATGGCTGAAGAATCAGGTGTCTGGTCTAGACCCAACTATGACAATTTCACCCAATGTATAGACCTGCCAAGAAATCATAAAAAGCTAGATGAAAAGACCAATGGCTACATTCTAGTAAATGCTAATGGTGGCCTGAATCAAATGAGATTTGGGATATGTGATATGGTTGCTGTTGCTAAGATTATGAAGGCAACACTTGTTCTTCCTTCTCTCGATCACACCTCTTACTGGGGTGATGCAAGTGGCTTCAAGGATTTATTTGACTGGAAACATTTTATTGAGACATTGAAGGATGATATCCACGTAGTTGAGACATTACCACCTGCCTATGCTGAAATTGAACCTTTCTCGAAAACTCCAATATCTTGGTCTAAGGCCAGTTACTACAAGAATGAGGTTCTTCCCCTGCTAAAGCAGCATAAAGTGATCTATTTCACCCATACCAATTCCAGACTTGCTAATAATGGAATTCCAAGCTCCATACAAAAGCTAAGATGTCGTGTAAATTATAGAGCATTGAAATATTCAGCTCCGATTGAAGAATTCGGAAGCAAATTAATATCTAGAATGCGACAGAATGAAAATCCTTATCTCGCGCTTCATTTGAGGTATGAGAAGGATATGCTTGCATTTACTGGCTGCAGTCACAATTTGACAGCAGAAGAAGATGAAGAGCTACGACAGATGCGGTATGAAGTTGGTCACTGGAAGGAGAAGGAGATTAATGGGACTGAGAGGAGATTGACTGGAGGTTGTCCATTAACTCCTAGGGAAACTTCCCTATTGCTTAGAGCACTAGGTTTTCCATCACAAACCAGGATTTATCTGGTAGCTGGAGAAGCATATGGTAGAGGAAGTATGAAATATCTTGAGGATGCTTTCCCCAACATTTTCTCTCATTCCTCTCTGTCTTCTGAAGAAGAGTTGAATCCTTTCAAGAATCACCAGAACATGTTAGCTGGCATAGACTATATTGTTGCACTTCAGAGTGATGTATTTCTCTATACTTATGATGGAAATATGGCAAAGGCAGTACAAGGCCATAGGCACTTCGAAAACTTCAAGAAGACTATCAATCCAGACAAGGTAAATTTTGTTAAACTCGTTGATAAGTTGGATGAAGGAAAAATTTCTTGGAAGAAGTTCAGCTCCAAGGTAAAAAGGCTGCATGAAGATCGAATCGGTGCTCCGTATCCCAGGGAGCGGGGAGAATTTCCTAAGCTAGAGGAAAGTTTTTATGCAAATCCTCTGCCAGGATGTATATGTGAAAGAAAATTAGATACTTCACAGTAG 1794 0.4147 MTLTNMAHNNINSTTMDGVPHRVNSPRYTGSMTRRAHSFKRNNNSNNEIELQINSPRSPLVSAEGSVLKRNQHHHKEKKNKFGHWVFLLFCGVCLFLGLLKICASAWWFGSKVHSTHESIIQELSDSITSRNLMDQSSHGYAYREGANEVERTLKMVTTGVIDSQAGMAEESGVWSRPNYDNFTQCIDLPRNHKKLDEKTNGYILVNANGGLNQMRFGICDMVAVAKIMKATLVLPSLDHTSYWGDASGFKDLFDWKHFIETLKDDIHVVETLPPAYAEIEPFSKTPISWSKASYYKNEVLPLLKQHKVIYFTHTNSRLANNGIPSSIQKLRCRVNYRALKYSAPIEEFGSKLISRMRQNENPYLALHLRYEKDMLAFTGCSHNLTAEEDEELRQMRYEVGHWKEKEINGTERRLTGGCPLTPRETSLLLRALGFPSQTRIYLVAGEAYGRGSMKYLEDAFPNIFSHSSLSSEEELNPFKNHQNMLAGIDYIVALQSDVFLYTYDGNMAKAVQGHRHFENFKKTINPDKVNFVKLVDKLDEGKISWKKFSSKVKRLHEDRIGAPYPRERGEFPKLEESFYANPLPGCICERKLDTSQ 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01652 597 PIRSF UCP009360 41 592 IPR024709 -
Gma15g01652 597 CDD O-FucT_plant 203 524 IPR024709 -
Gma15g01652 597 Pfam GDP-fucose protein O-fucosyltransferase 203 518 IPR019378 -
Gma15g01652 597 MobiDBLite consensus disorder prediction 1 23 - -
Gma15g01652 597 PANTHER OS02G0726500 PROTEIN-RELATED 79 594 - -
Gma15g01652 597 PANTHER O-FUCOSYLTRANSFERASE 28 79 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01652 Gma-Chr15 17094615 17099600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01652 88 591 Miscellaneous Gene Families AT2G37980 57.915 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01652 - - gmx:100807090 1213.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01652 15 17094615 17099600 Gma15g01652 15 17094615 17099600 ECH
Gma15g01652 15 17094615 17099600 Gma09g00634 09 7178105 7193189 GST
Gma17g00468 17 3852474 3858399 Gma15g01652 15 17094615 17099600 PCT
Gma13g00901 13 23175469 23181135 Gma15g01652 15 17094615 17099600 PCT
Gma15g01652 15 17094615 17099600 Gma17g00468 17 3852474 3858399 PCT
Gma15g01652 15 17094615 17099600 Gma13g00901 13 23175469 23181135 PCT