Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00467 ATGGCCACCACTAATCCAATTCCAAATCTCAATTCCCCACCCTCCCATCCTCCCAATTTCGATTCCGATTCCGATTCCGACATTGACGCCCTCATCGACAGTTTTTTCGAACAACCCTCGCCCTCTCTCCCTCACTACGGATCCAACGCCAACACCACTCTCAAGAGAGGAATTGATGTCCCCTCCGTTGATTATTTCGACACTGCCATATCCATCAAGCGCGGCAGGATTAGCAATGCCGCCACCCACGGCTCTGATGATCAACACCACGCCACCTTTGAAATTCAAAACCCTTCTCCTCCTCCTCCTCTCTCCCAGGATCCTGGAGGACCCATCGCTGATCACAATCACGGAGGAGGAGGAGGAGAAGATCAGCAAGGGAAACGGCCAGTGTTTGAAATTGATTTTATATCTAAGGCTCTTCGTGAAGCTGAATTAGGTTTAGCGCTGAATTCTCACGATAACGCCGACGACTTTGACGACGACGACATGGAACCTAAGAATGAGAATCATGATTTACACTATGTACCAATGAGTTTTTACAGAAGGAATAGGAACATGGAACGTTTCCGAGTGATAGCGAAGAGAAACGCCACTCACTATGCTCGGTTCGACGACTCGGAGGTTGGAGATGAAGGGACATCATTGTATCTTAATCCTCAAGGAAACATTGACGATTCCGAAACTCCATTTTCGATTGCCATGAAGGCGATCAAGGATCGAGCTATGAAGAAGAAGGTGTGTGATGCCTGGGTTCCCAAGAGGAATCCACAAGGGGGGGAGAAGAGGTTTTTTCTGGTGCCTTCTCTTCAAGAACTGTGCCTTGAAATTCTTGCGAATAATGCTGATGCAATGGTTTCGCTTGAGGGTGTACCAGATGAGCTGAGACGCAAGCTTTCCAAGCTGCTCTGTGACTCGAGAAAGATGAATAGTCGATTTCTTGAGCTTCTTCTCAGTGGCTCTCCCACTGAGATTCGGATAAAAGACTGTTCTTGGTTGACGGAGGAACAGTTTGCCAAATCTTTTCAAACGTGTGACACTACAAGATTGGAGGTGCTGCAGCTTGACCAGTGTGGAAGGTGTATACCTGATTATGCATTACTTGGTACTTTGAGACAGTCACCAAGGTGGTTGCCAAAGTTAATTACCCTGTCCCTCAGTGGTGCGTGCCGCCTGTCAGATAAGGGGTTGCATGTGCTAGTTTCTTCTGCACCAGCACTGAGATCCATTAACCTAAGCCAGTGCTCCCTTCTCTCATCTGCCAGTATTAATATTTTGGCTGATTCATTGGGATCCCTTTTGAAAGAGTTGTATCTAGATGATTGCCTAATGATTGATGCTGCACAAATTGTGCCAGGACTGAAGAAACTTGAACATTTAGAGGTGTTGTCATTGGCTGGCATTCAAACTGTCTCCGATGAATTTATCAAGAATTACATCATTGCATGTGGTCACAACATGAAGGAGCTTATTTTCAAAGACTGTAGAAAATTGACTGATGCATCGATAAAAGTCATTGCTGAACACTGTCCTGGGTTGTGTGCACTTGATCTTATGAACTTGGACAAATTGACAGATTTATCCTTAGGATATCTTACAAATAGTTGTCAAGCACTTCGTACATTGAAGCTCTGCCGCAATCTATTCAGTGATGAAGCAATTGCTGCATTCTTGGAGATTACTGGAGAGTCCTTGAAAGAACTTTCACTTAACAATATTAAGAAGGTTGGCCACCACACAACCATATCACTTGCGAGGCATGCAAAAAATTTGCATACCCTAGATCTATCTTGGTGCCGGAATTTGACAGACAACGAGTTGGGTTTCATTGTAGATAGCTGCTTCTCACTGAGGTTGCTTAAACTTTTTGGATGCTCACTGGTGACAGATGTTTTTCTGAACGGGCACTCAAACCCAGAGATTCAGATCCTTGGATTGAAGATGTCCCCTTTATTGCAAAATGTCAAAGTGCCTGAACCCTATCAAGGTCCCTTGCGTTATTCACCAGTTTCAGTAGATTTGGTATAA 2028 0.4482 MATTNPIPNLNSPPSHPPNFDSDSDSDIDALIDSFFEQPSPSLPHYGSNANTTLKRGIDVPSVDYFDTAISIKRGRISNAATHGSDDQHHATFEIQNPSPPPPLSQDPGGPIADHNHGGGGGEDQQGKRPVFEIDFISKALREAELGLALNSHDNADDFDDDDMEPKNENHDLHYVPMSFYRRNRNMERFRVIAKRNATHYARFDDSEVGDEGTSLYLNPQGNIDDSETPFSIAMKAIKDRAMKKKVCDAWVPKRNPQGGEKRFFLVPSLQELCLEILANNADAMVSLEGVPDELRRKLSKLLCDSRKMNSRFLELLLSGSPTEIRIKDCSWLTEEQFAKSFQTCDTTRLEVLQLDQCGRCIPDYALLGTLRQSPRWLPKLITLSLSGACRLSDKGLHVLVSSAPALRSINLSQCSLLSSASINILADSLGSLLKELYLDDCLMIDAAQIVPGLKKLEHLEVLSLAGIQTVSDEFIKNYIIACGHNMKELIFKDCRKLTDASIKVIAEHCPGLCALDLMNLDKLTDLSLGYLTNSCQALRTLKLCRNLFSDEAIAAFLEITGESLKELSLNNIKKVGHHTTISLARHAKNLHTLDLSWCRNLTDNELGFIVDSCFSLRLLKLFGCSLVTDVFLNGHSNPEIQILGLKMSPLLQNVKVPEPYQGPLRYSPVSVDLV 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00467 675 MobiDBLite consensus disorder prediction 80 128 - -
Gma17g00467 675 PANTHER UNCHARACTERIZED 143 668 - -
Gma17g00467 675 Gene3D Ribonuclease Inhibitor 449 563 IPR032675 -
Gma17g00467 675 MobiDBLite consensus disorder prediction 1 58 - -
Gma17g00467 675 MobiDBLite consensus disorder prediction 81 95 - -
Gma17g00467 675 PANTHER F-BOX/LRR PROTEIN 143 668 - -
Gma17g00467 675 MobiDBLite consensus disorder prediction 41 56 - -
Gma17g00467 675 SMART LRR_CC_2 510 535 IPR006553 -
Gma17g00467 675 SMART LRR_CC_2 484 509 IPR006553 -
Gma17g00467 675 SMART LRR_CC_2 404 429 IPR006553 -
Gma17g00467 675 SMART LRR_CC_2 588 613 IPR006553 -
Gma17g00467 675 SMART LRR_CC_2 378 403 IPR006553 -
Gma17g00467 675 SMART LRR_CC_2 536 560 IPR006553 -
Gma17g00467 675 SMART LRR_CC_2 562 587 IPR006553 -
Gma17g00467 675 Gene3D Ribonuclease Inhibitor 266 448 IPR032675 -
Gma17g00467 675 Gene3D Ribonuclease Inhibitor 564 655 IPR032675 -
Gma17g00467 675 SUPERFAMILY RNI-like 322 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00467 Gma-Chr17 3841920 3846272 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00467 K15082 - gmx:100798274 1248.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00467 17 3841920 3846272 Gma17g00467 17 3841920 3846272 ECH
Gma17g00467 17 3841920 3846272 Gma13g00902 13 23185506 23189210 GST
Gma17g00467 17 3841920 3846272 Gma15g01655 15 17127309 17133170 PCT
Gma17g00467 17 3841920 3846272 Gma09g00635 09 7197524 7200162 PCT
Gma15g01655 15 17127309 17133170 Gma17g00467 17 3841920 3846272 PCT
Gma09g00635 09 7197524 7200162 Gma17g00467 17 3841920 3846272 PCT