Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00902 ATGAAGAAGAAAGTGTGTGACGCCTGGGTTCCCAAGAGGAATCAAAAAGGGGGGGAGAAGGGCTTTTTTTTTGTGCCCTCTCTTCAAGAACTCTGCCTTGAAATGCTTGCGGATAATGCTGATGCAATGGTTTCGCTTGAGGGTGTACCGGATGAGCTGATACGCAAGCTTTGCAACCTGCTCTGTGACTCAAGAAAGATGAACACCCGATTTCTTGAGCTTCTTCTCAGTGGCTCTCCCACGGAGATTCGGTTAAAAGACTGTTCTTGGTTGACGGAGGAGCAGTTTGCCAAATATTTTCAAACGTGTGACACTACAAGATTGGAGGTGCTGCAGCTTGACCAGTGTGGAAGGTGTATACCTGATTATGCATTACTTGGTACTTTGAGACAGTCACCAAGGTGGTTGCCAAAGTTAATTACACTGTCCCTCAGTGGTGCGTGCCGTCTGTCAGATAAGGGGTTGCATGTGCTAGCTTCTTCTGCCCCAGCACTGAGATCCATTAATCTAAGCCAGTGCTCCCTTCTCTCATCTGCCAGTATTAATATTTTGGCTGATTCATTGGGATCCCTTCTGAAAGAGTTATATCTTGATGATTGTCTTATGATTGATGCTGCACAAATTGTGCCAGGACTGAAGAAACTTAAACATTTAGAGGTGTTGTCATTGGCTGGCATTCAAACTGTCTCTGATGAATTTATCAAGGACTACATCATTGAATGTGGTCACAACATGAAGGAGCTTATTTTAAAAGACTGTCGAAAATTGACTGATGCATCGATTAAAGGCGTTGCTGAACACTGTCCTGGATTGTGTGCACTTGATCTTATGAACTTGGACAAATTGACAGATTTATCCTTAGGATATCTTACAAATAGTTGTCGAGCACTTCATACATTGAAGCTCTGCCACAATCCATTCAGTGATGAAGCAATTGCTGCCTTCTTGGAGATTACTGGAGTGTCCTTGAAAGAACTTTCACTTAATAATATTAAGAAGGTACATTGCTATACTTGCCTGCTGACTTTTCTCTCCATTGGCTCGTTTGGCCACCACACAACCTTATCACTTGCTAGGCATGCAAAAAATTTGCATATTCTAGATCTATCTTGGTGCCGGAATTTGACAGACAATGAGTTGGGTTTCATTGTAGATAGCTGCTTCTCACTGAGGTTGCTTAAAATTTTTGGATGCTCACTGGTGACAGATGTTTTTCTGAATGGGCACTCAAACCCAGAGATTCAGATCCTTGGATTGAAGATGTCTCCTTTATTGCAAAATGTCAAAGTGCCCGAACCCTGTCAAGGTCCTCTGCGTTATTCACCAGTTTCAGTAGATTTGGTATAA 1347 0.4261 MKKKVCDAWVPKRNQKGGEKGFFFVPSLQELCLEMLADNADAMVSLEGVPDELIRKLCNLLCDSRKMNTRFLELLLSGSPTEIRLKDCSWLTEEQFAKYFQTCDTTRLEVLQLDQCGRCIPDYALLGTLRQSPRWLPKLITLSLSGACRLSDKGLHVLASSAPALRSINLSQCSLLSSASINILADSLGSLLKELYLDDCLMIDAAQIVPGLKKLKHLEVLSLAGIQTVSDEFIKDYIIECGHNMKELILKDCRKLTDASIKGVAEHCPGLCALDLMNLDKLTDLSLGYLTNSCRALHTLKLCHNPFSDEAIAAFLEITGVSLKELSLNNIKKVHCYTCLLTFLSIGSFGHHTTLSLARHAKNLHILDLSWCRNLTDNELGFIVDSCFSLRLLKIFGCSLVTDVFLNGHSNPEIQILGLKMSPLLQNVKVPEPCQGPLRYSPVSVDLV 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00902 448 SMART LRR_CC_2 136 161 IPR006553 -
Gma13g00902 448 SMART LRR_CC_2 268 293 IPR006553 -
Gma13g00902 448 SMART LRR_CC_2 361 386 IPR006553 -
Gma13g00902 448 SMART LRR_CC_2 294 318 IPR006553 -
Gma13g00902 448 SMART LRR_CC_2 242 267 IPR006553 -
Gma13g00902 448 SMART LRR_CC_2 162 187 IPR006553 -
Gma13g00902 448 Gene3D Ribonuclease Inhibitor 238 343 IPR032675 -
Gma13g00902 448 SUPERFAMILY RNI-like 337 419 - -
Gma13g00902 448 Gene3D Ribonuclease Inhibitor 44 237 IPR032675 -
Gma13g00902 448 Gene3D Ribonuclease Inhibitor 344 430 IPR032675 -
Gma13g00902 448 PANTHER F-BOX/LRR PROTEIN 8 441 - -
Gma13g00902 448 SUPERFAMILY RNI-like 105 333 - -
Gma13g00902 448 PANTHER UNCHARACTERIZED 8 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00902 Gma-Chr13 23185506 23189210 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00902 K15082 - gmx:100798274 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00902 13 23185506 23189210 Gma13g00902 13 23185506 23189210 ECH
Gma17g00467 17 3841920 3846272 Gma13g00902 13 23185506 23189210 GST
Gma13g00902 13 23185506 23189210 Gma15g01655 15 17127309 17133170 PCT
Gma13g00902 13 23185506 23189210 Gma09g00635 09 7197524 7200162 PCT
Gma15g01655 15 17127309 17133170 Gma13g00902 13 23185506 23189210 PCT
Gma09g00635 09 7197524 7200162 Gma13g00902 13 23185506 23189210 PCT