Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00412 ATGTTTAGATTAAGGAGTTGTGAAGGCCCTGTGCGCTACTTGTATCAGCAAACTCGGCATCACCTTCACCATAACAACAATATTATGGCTTATTTAGTTGGTTATGATCCTTGTTCCCACTTGAGCAAGGCCTTTTCTCAGTATCCTTCTCTTCCTTCTTCTGATCGTGGTAGCTACCTGTCTTTCCGATTTCTCCATAATCTTGTTTATGCTGATGTTTTTGGGGTTAGCAGAAGCATTGCTTTTGGTCCTAGAAGTTGTAGCTTTGACACTAGTGGTAGCTGTAGTAGTACTAATAGTGATAGGATCTTTGTGAGGGCAAAGGCAAGGTCCCGTGGCTTTGCATCGAATTGCCGCCAGCCGATGCTGGCTGATTTGGAGCAAAGGAATTTTGTTAGGAGTGATGAGAGTGATGCTACTTTGGTTAAGGTTGATAATGGATCTATAAATGGATGTCCTGCCAAGCCTCCTTGTTTCAATGATCATCGATTGTCCCAGAAACTTGTGGTTGCTGTTGATGTTGATGAGGTATTAGGAAACTTTGTGTCAGCTCTCAACAAGTTCATTGCAGATCGATATTCATCAAATTATTCAGTTTCTGAATATCATGTGTATGAGTTCTGCAAGATATGGAATTGTTCACGTGATGAAGCTGATATCCGTGTTCATGAGTTTTTTAAGACACCATATTTCAAGTCAGGGATCCACCCTCTTCCAGGTGCTCAGATGGCTCTTCAGAAGTTATCAAGATTTTGTAGCCTATCAGTTGTAACATCACGACAGAATGCAATTAAGGACCACACAATTGAGTGGCTAGAGAAGAATTATCCTGGACTGTTTCATGAGATTCACTTTGGTAACCACTTTGCTCTTGATGGTGTGTCAAGACCAAAGTCAGAAATTTGTAGGTCTTTAAATGCCAAGGTTCTTATTGATGATAACCCACGGTATGCCATAGAGTGTGCTGATGTTGGAATTAGAGTCTTACTTTTTGATTATGAAAACTCATATCCTTGGTGCAAGAACGAGTCTGTTGATCAGCATCCACTGGTGACCAGAGTTAAGAACTGGGAAGAAGTGGAACAACAATTAATGTCACTGATAGCTTCTTAG 1113 0.4088 MFRLRSCEGPVRYLYQQTRHHLHHNNNIMAYLVGYDPCSHLSKAFSQYPSLPSSDRGSYLSFRFLHNLVYADVFGVSRSIAFGPRSCSFDTSGSCSSTNSDRIFVRAKARSRGFASNCRQPMLADLEQRNFVRSDESDATLVKVDNGSINGCPAKPPCFNDHRLSQKLVVAVDVDEVLGNFVSALNKFIADRYSSNYSVSEYHVYEFCKIWNCSRDEADIRVHEFFKTPYFKSGIHPLPGAQMALQKLSRFCSLSVVTSRQNAIKDHTIEWLEKNYPGLFHEIHFGNHFALDGVSRPKSEICRSLNAKVLIDDNPRYAIECADVGIRVLLFDYENSYPWCKNESVDQHPLVTRVKNWEEVEQQLMSLIAS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00412 370 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 168 364 IPR010708 GO:0008253|GO:0009264
Gma17g00412 370 Gene3D - 216 367 IPR023214 -
Gma17g00412 370 PANTHER NUCLEOTIDASE YQFW-RELATED 76 369 - -
Gma17g00412 370 SUPERFAMILY HAD-like 161 365 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00412 Gma-Chr17 3337144 3340623 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00412 - - gmx:100783615 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00412 17 3337144 3340623 Gma17g00412 17 3337144 3340623 ECH
Gma17g00412 17 3337144 3340623 Gma13g00957 13 23734407 23736489 GST
Gma17g00412 17 3337144 3340623 Gma09g00720 09 8659118 8674943 PCT
Gma09g00720 09 8659118 8674943 Gma17g00412 17 3337144 3340623 PCT