Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00957 ATGTTTAGATTAAAGAGTTGTGAAGGCCCTGTGCGCTACTTGTATCAGCAAACTTGGCATCACCTTTATCATAACAATATTATGGCTTATTTAGTTGGTTATGATCCTTGTTCCCACTTGAGCAAGGCCTTTTCTCAGTACCCTTCTCTTTCTTTTTCTGATCGTGGTAGCTACCTGTCTTTCCCATTTCTCCGTAATCTTGTTTATGCTAATGTTTTTGGGGTTAGCAGAAGCATTGGTTTTGGTACTAGAGGTTGTAGCTTTGACACTAGTGGTAGCTGCAGTGGTAATAGTGATAGGATCTTTGTGAGGGCAAAGACAAGGTCCCGTGGCTTTGCATCGAATCGCCGCCAGCCGATGTTGGCTGATTTGGAGCAAAGGAATTCTGTTAGGAGTGATGAGAGTGATGCTACTTTGGTTAAGGTTGATAATGGATCTATAAATGGAAGTCCTGCTAAGCCTCCTTGTTTCAGTGATCATCGATTATCCCAGAAACTTGTGGTTGCTGTTGATGTTGATGAGGTATTAGGAAACTTTGTGTCAGCTCTCAACAAGTTCATTGCAGATCGATATTCATCAAATTATTCAGTTTCTGAGTATCACGTGTATGAGTTCTGCAAGGTATTATTTGTCTGCTTTGGTAATTCTCTGACTGATATCCGTGTTCACGAGTTTTTTAAGACACCATATTTCAAGTCAGGGATCCATCCTCTTCCAGGTGCTCAGATGGCTCTTCAGAAGTTATCAAGATTTTGTAGCCTATCAGTTGTAACATCACGGCAGAATGCAATCAAGGACCGCACAATTGAGTGGATAGAGAAGAATTATCCAGGACTGTTTCGTGAGATTCACTTCGGTAACCACTTTGCTCTTGATGGTGTGTCAAGACCAAAGTCAGAAATTTGTAGGTCTTTAAAAGCCAAGGTTCTTATTGATGATAACCCACGATATGCCATAGAGTGTGCTGATGTTGGAATTAGAGTCTTACTTTTTGATTATGAAAACTCATATCCTTGGTGCAAGAACGAGTCTGTTGATCAGCATCCTCTGGTGACCAAAGTTAAGAACTGGGAAGAAGTGGAACAACAATTAGTGTCTCTGATAGCTTCTTAG 1113 0.4088 MFRLKSCEGPVRYLYQQTWHHLYHNNIMAYLVGYDPCSHLSKAFSQYPSLSFSDRGSYLSFPFLRNLVYANVFGVSRSIGFGTRGCSFDTSGSCSGNSDRIFVRAKTRSRGFASNRRQPMLADLEQRNSVRSDESDATLVKVDNGSINGSPAKPPCFSDHRLSQKLVVAVDVDEVLGNFVSALNKFIADRYSSNYSVSEYHVYEFCKVLFVCFGNSLTDIRVHEFFKTPYFKSGIHPLPGAQMALQKLSRFCSLSVVTSRQNAIKDRTIEWIEKNYPGLFREIHFGNHFALDGVSRPKSEICRSLKAKVLIDDNPRYAIECADVGIRVLLFDYENSYPWCKNESVDQHPLVTKVKNWEEVEQQLVSLIAS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00957 370 PANTHER NUCLEOTIDASE YQFW-RELATED 73 369 - -
Gma13g00957 370 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 166 364 IPR010708 GO:0008253|GO:0009264
Gma13g00957 370 SUPERFAMILY HAD-like 159 364 IPR036412 -
Gma13g00957 370 Gene3D - 220 367 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00957 Gma-Chr13 23734407 23736489 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00957 - - gmx:100793947 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00957 13 23734407 23736489 Gma13g00957 13 23734407 23736489 ECH
Gma17g00412 17 3337144 3340623 Gma13g00957 13 23734407 23736489 GST
Gma13g00957 13 23734407 23736489 Gma09g00720 09 8659118 8674943 PCT
Gma09g00720 09 8659118 8674943 Gma13g00957 13 23734407 23736489 PCT