Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00355 ATGACAATTGTACGCTATCATTTTAAACGGCTACATTTTGTTCAAGGTTTACTGAAAATGAAGAAATGGTATGGAGGCTTGTTGATAATGGCTTTGGGTATGATGTTGTTGTTCCTCTACAATGTCAAAGGAATTCAGCCGCAGAAGCAATCCGCAAAACAGTCGGCATATAATTTCTTCCATAATCATACACCTGGTGATTCTATTAATGGAAGCAGCAATCTTCCAGTAAACTCTTCCGAGGTGGAACTAAAAAGGGTAACAACACCAGCAAAAAGGCCACATTTGGTACATGTTGCAGGGCTAGATGATCTGTATGACATGAAAAATCTATCGAAAGAAGAGACGAATTCTGTGCTAATTTGGGATTCCTTACGTTCCTTGCTGTCAAGGTCAGATGCTTTGGCTGAAACAGCTCAAGGAGTTAAAGAGGCTTCTGTAGCATGGAAAGAATTGCTGTCCATTGTTGAAAAGGACAAAGCTTCTAAGATTAATAAGATGGATGGCCCAGAAAATCAAAACTGCCCATTCTCGGTGACCTCGCCTGGTAAGGCTGTACCAGATAGTGGAATCACTCTTGATCTCCCTTGTGGTCTGGTTGTAGATTCTTCTATTACACTGATTGGAATCCCTAACAACAGAAGCTTCCAGATTGACCTTGCTGGGCTAGAGCAAGAAGGGGAGCCAAATCCTCCAATTATCTTGCATTATAATGTGAGTCTTCCTGGAGAAAACATGACAGAGGAACCATATATTGTTCAAAATACATGGACTAGTGATTTAGGGTGGGGAAAAGAGGAAAGGTGTCCTGCTCGTGGTTCTGCCAACATTCAAGAAGTTGATGGACTTGTTCTCTGCAACATACAAGCTGTCAGAAGTAACAACAAAGGGAATGCAAATGTTGACCAACCTGCTAGTGATATACCTTCTAATATTTCCTCAGAAAGTGTACATAGAACCGCTAATTTTCCCTTTGCTGAGGGTAATCCTTTCACTTCCACATTGTGGGTTGGTTCAGAGGGATTTCATATGACTGTGAATGGAAGGCATGAAACGTCTTTTGCATATAGGGAGAAACTTGAACCATGGTTAGTCAGCAGTATTAAAGTAGCAGGCAGTTTAAGTCTCTTATCAATCCTGGCTAAGGGTTTGCCTGTTACTGAAGATAATGATATAGTTGTTGATATTGAGAATCTGAAGGCTCCTTCTATCGCCAGAAAAAGGCTTGCTTTGTTGATTGGAGTATTTTCTACCGGAAACAATTTTGAACGTCGCATGGCCCTGAGGAGGTCTTGGATGCAATATGAGGCCGTACATTCTGGAGAAGTTGCTGTCCGATTTTTCATTGGGCTTCACAAGAACAATAGGGTTAATTTTGAGTTATGGACTGAAGCTCAAGCATATGGAGATATTCAGTTAATGCCTTTTGTAGATTATTATAGTTTGATTTCTTTGAAGACAATTGCAATTTGCATTATGGGGACAAAAATCATCCCTTCTAAATACATCATGAAAACAGATGATGATGCCTTTGTTAGGATTGATGAAGTGCTTTCCAGCCTTAAAGGAAAGCCATCGGAAGGCCTCTTGTACGGTCTCATATCTTCTAAATCATCTCCTCAGAGGGACGAAGGCAGCAAGTGGTACATCAGTGAGGAGGAATGGCCCCATGATACATACCCACCATGGGCACATGGTCCTGGCTATGTTATCTCACGAGACATAGCAAAATTTATTGTCCATGCCCACCAAGAAAGAAAACTCAAGCTCTTTAAATTAGAAGATGTTGCCATGGGCATATGGATTGAACAGTTCAAGAATGATGGTAAAGAAGTACATTATGAAAATGATGAGAGGTTTTACAACGCTGGATGTGAATCAAATTATGTAATTGCCCATTATCAAAGTCCGAGGATGGTGCTATGCCTTTGGGAGAAATTACAGAAAGAACACCAGCCAGTGTGCTGTGAGTAA 1974 0.4083 MTIVRYHFKRLHFVQGLLKMKKWYGGLLIMALGMMLLFLYNVKGIQPQKQSAKQSAYNFFHNHTPGDSINGSSNLPVNSSEVELKRVTTPAKRPHLVHVAGLDDLYDMKNLSKEETNSVLIWDSLRSLLSRSDALAETAQGVKEASVAWKELLSIVEKDKASKINKMDGPENQNCPFSVTSPGKAVPDSGITLDLPCGLVVDSSITLIGIPNNRSFQIDLAGLEQEGEPNPPIILHYNVSLPGENMTEEPYIVQNTWTSDLGWGKEERCPARGSANIQEVDGLVLCNIQAVRSNNKGNANVDQPASDIPSNISSESVHRTANFPFAEGNPFTSTLWVGSEGFHMTVNGRHETSFAYREKLEPWLVSSIKVAGSLSLLSILAKGLPVTEDNDIVVDIENLKAPSIARKRLALLIGVFSTGNNFERRMALRRSWMQYEAVHSGEVAVRFFIGLHKNNRVNFELWTEAQAYGDIQLMPFVDYYSLISLKTIAICIMGTKIIPSKYIMKTDDDAFVRIDEVLSSLKGKPSEGLLYGLISSKSSPQRDEGSKWYISEEEWPHDTYPPWAHGPGYVISRDIAKFIVHAHQERKLKLFKLEDVAMGIWIEQFKNDGKEVHYENDERFYNAGCESNYVIAHYQSPRMVLCLWEKLQKEHQPVCCE 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00355 657 CDD GLECT 192 379 IPR001079 GO:0030246
Gma17g00355 657 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE GALT1 105 649 - -
Gma17g00355 657 SMART Gal_bind_lectin_2 195 381 IPR001079 GO:0030246
Gma17g00355 657 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 105 649 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma17g00355 657 Gene3D - 403 640 - -
Gma17g00355 657 Gene3D - 185 380 - -
Gma17g00355 657 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 191 382 IPR001079 GO:0030246
Gma17g00355 657 SUPERFAMILY Concanavalin A-like lectins/glucanases 192 383 IPR013320 -
Gma17g00355 657 Pfam Galactoside-binding lectin 192 380 IPR001079 GO:0030246
Gma17g00355 657 Pfam Galactosyltransferase 423 606 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00355 Gma-Chr17 2858532 2864383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00355 1 657 Glycosyltransferase AT3G06440 51.212 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00355 K20843 - gmx:100816729 1296.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00355 17 2858532 2864383 Gma17g00355 17 2858532 2864383 ECH
Gma17g00355 17 2858532 2864383 Gma01g00446 01 5760003 5765879 PCT
Gma17g00355 17 2858532 2864383 Gma02g00989 02 10560551 10563818 PCT