Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00446 ATGAAGAAGTTGTATGGAGGAGTTCTGATTGCCTCACTGTTTACGTTGTTTATGCTTATGATCCTGCGATACGGGGTCATGAAAAATCCTATTGGTGAAGGTTATCTGACTATACCTGTCCTCATTAATGGTACTAATCCTCTATTATGGATAAATCCCACAGTACCGGATGCTATTAAAAAACATCCAGATGGTCATTCTCAAGTTATTTCTTCTGATATTTTAGTATCTAGCCTCTTTACTGGGAGCAACTTTTCCAAAGAAGAGCAACAAGCTCTGCAGACATGGAACCAATTGAACCACTTAATTGATAATGTTCAGGGTTTACCCAATGCAGCAGAAGCTATCAAGGAGGCTGCCAGTGTGTGGAATAGCCTTATTTCCTCAATTGAAGAGCAAAAGCAAGGTCATGGAAATGATAGTTCAAGAGCTAAAGAGAAGCAGTGTCCCCATTTTCTTAATAACATGAATTCCACTGAACTTGGTAATAGTAGTTATAAACTGCAATTACCTTGCGGCCTGACACAAGGTTCTTCCATCACCATAATTGGCATTCCAAATGGCCTGCTAGGTAATTTTCGGATTGACTTGACTGGAGAACCACTTCCTGGGGAGCCTGATCCTCCAATTGTTTTGCACTATAATGTTCGGCTTCATGGGGATAAAATCACTGAGGATCCAGTAATTGTCCAAAACTCCTGGACTCAAGCTCATGATTGGGGTGAAGAGGATCGTTGTCCATCCCCTACTCCTGAAAAGTTTGACAAAGTTGATGATTTGGAGCAGTGCAATAAGATTGTAGGGAAGAACATTAGCCAACGTCACCCAGCTGGCATGCATTCCCACACTTCAAGACAATCTTCAACAATGGACGAACAATCAGTAAATAGGAAATACTTTCCTTTTAAGCAAGGTTACCCATTTGTGGCAACTCTTAGAGTGGGATCTGAAGGAATCCAGATGACAGTTGATGGGAAGCACATAACCTCGTTTGCTTTCCGTGAAACTTTGGAGCCATGGCTAGTCAGTGAAATAAAAATCTCAGGGGACCTCAAATTAATATCTATTCTTGCCAGTGGTTTGCCCACATCAGAGGATTCAGAGCATATTATTGACCTAGAATCATTGAAATCAAGTCCTATATCTGCACAGACCCCATTGGATCTCTTCATTGGTGTTTTCTCTACTGCTAACAATTTCAAGCGTCGGATGGCTGTTAGAAGAACCTGGATGCAGTACAATGCAGTTCGATCAAATACAACAGCTGTGCGCTTCTTTGTTGGTTTGCATAAAAGCACTGTAGTTAATGAAGAGTTGTGGAGAGAAGCACGGACTTATGGAGACGTGCAGCTGATGCCATTTGTTGACTACTACAGCCTCATCACCTGGAAATCTTTAGCTATCTGCATTTTTGGGACACAAGTTTCTGCAAAGTTTGTCATGAAGACAGATGATGATGCATTTGTCCGGGTAGATGAAGTTCTAGACTCTTTGCACAGAATCAATGCGGATCATGGGTTACTATATGGACTCATCAATTTGGATTCCAGACCTCATCGAAATACAGATAGCAAATGGTACATCAGCCCAGAGGAATGGAGCGAAGGAACTTATCCTCCTTGGGCACATGGTCCCGGCTATGTGGTCTCACATGATATCGCTAGGACGGTGTCCAAGAAATTCAGAGAGAACCATTTGAAGATGTTTAAACTAGAAGACGTTGCAATGGGAATCTGGATCGCTGACATGAAGAAGGAAGGTCTAGAAGTTCGCTATGAGAATGAGGTCAGAGTGTACCCTGAAGGTTGTAAGGATGGTTATGTGGTTGCCCATTACCAAGGCCCTAGGGAGATGCTCTGTTTGTGGCAGAAGCTTCAGGTAGATAAACGTGCAAAATGCTGTGGTGATAGTAGGAAATGA 1920 0.4234 MKKLYGGVLIASLFTLFMLMILRYGVMKNPIGEGYLTIPVLINGTNPLLWINPTVPDAIKKHPDGHSQVISSDILVSSLFTGSNFSKEEQQALQTWNQLNHLIDNVQGLPNAAEAIKEAASVWNSLISSIEEQKQGHGNDSSRAKEKQCPHFLNNMNSTELGNSSYKLQLPCGLTQGSSITIIGIPNGLLGNFRIDLTGEPLPGEPDPPIVLHYNVRLHGDKITEDPVIVQNSWTQAHDWGEEDRCPSPTPEKFDKVDDLEQCNKIVGKNISQRHPAGMHSHTSRQSSTMDEQSVNRKYFPFKQGYPFVATLRVGSEGIQMTVDGKHITSFAFRETLEPWLVSEIKISGDLKLISILASGLPTSEDSEHIIDLESLKSSPISAQTPLDLFIGVFSTANNFKRRMAVRRTWMQYNAVRSNTTAVRFFVGLHKSTVVNEELWREARTYGDVQLMPFVDYYSLITWKSLAICIFGTQVSAKFVMKTDDDAFVRVDEVLDSLHRINADHGLLYGLINLDSRPHRNTDSKWYISPEEWSEGTYPPWAHGPGYVVSHDIARTVSKKFRENHLKMFKLEDVAMGIWIADMKKEGLEVRYENEVRVYPEGCKDGYVVAHYQGPREMLCLWQKLQVDKRAKCCGDSRK 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00446 639 SMART galectin_3 166 359 IPR001079 GO:0030246
Gma01g00446 639 CDD GLECT 166 356 IPR001079 GO:0030246
Gma01g00446 639 PANTHER - 66 627 - -
Gma01g00446 639 SUPERFAMILY Nucleotide-diphospho-sugar transferases 474 605 IPR029044 -
Gma01g00446 639 Pfam Galactosyltransferase 401 584 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma01g00446 639 Gene3D - 379 603 - -
Gma01g00446 639 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 66 627 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma01g00446 639 Pfam Galactoside-binding lectin 166 357 IPR001079 GO:0030246
Gma01g00446 639 SMART Gal_bind_lectin_2 170 358 IPR001079 GO:0030246
Gma01g00446 639 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 166 359 IPR001079 GO:0030246
Gma01g00446 639 SUPERFAMILY Concanavalin A-like lectins/glucanases 166 359 IPR013320 -
Gma01g00446 639 Gene3D - 158 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00446 Gma-Chr1 5760003 5765879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00446 1 634 Glycosyltransferase AT1G26810 63.863 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00446 K14413 - gmx:100780913 1311.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00446 01 5760003 5765879 Gma01g00446 01 5760003 5765879 ECH
Gma01g00446 01 5760003 5765879 Gma02g00989 02 10560551 10563818 GST
Gma17g00355 17 2858532 2864383 Gma01g00446 01 5760003 5765879 PCT