Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00312 atggaaGGTGCAGACGAAGGAATAGAGAGGGTTGTGGATTCGAAGGACTTGCAGCAACAGAGCAAAGCTTTCGACAAGCTCACAGACCGCGTCGAGGATCGCCAACTCGATTCTTCTCGCGTCCAAGAGGCCATGGCATCAATTGCTGCATCTGCTGAAGCTGACTGGCAAGCCATGCGTATGAGGGAGAAAGAGTTAGCTGCTGTCAAGATAAATGCCGCTGATGTTGACATAATTGCGAATGAACTAGAGCTGGATAAAAAGGTTGCTGAAAGGACCTTGCGTGAGCATAAAGGTGATGCAGTAGCTGCAATCCGGCACTTGCTTCGCTAG 333 0.4925 MEGADEGIERVVDSKDLQQQSKAFDKLTDRVEDRQLDSSRVQEAMASIAASAEADWQAMRMREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRHLLR 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00312 110 Coils Coil 80 100 - -
Gma17g00312 110 CDD UBA_HYPK 69 109 IPR038922 -
Gma17g00312 110 PANTHER HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER 1 109 - -
Gma17g00312 110 PANTHER BNAA05G30770D PROTEIN 1 109 - -
Gma17g00312 110 Pfam HYPK UBA domain 69 109 IPR044034 -
Gma17g00312 110 Gene3D - 70 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00312 Gma-Chr17 2513646 2514494 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00312 - - gmx:100789285 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00312 17 2513646 2514494 Gma17g00312 17 2513646 2514494 ECH
Gma17g00312 17 2513646 2514494 Gma15g01304 15 11558219 11561069 PCT
Gma17g00312 17 2513646 2514494 Gma09g00317 09 2972968 2975445 PCT
Gma15g01304 15 11558219 11561069 Gma17g00312 17 2513646 2514494 PCT
Gma09g00317 09 2972968 2975445 Gma17g00312 17 2513646 2514494 PCT