Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01304 ATGGAGGGTGGAGAGGAAGGATTGGAGATGATGGTGGACTCAAAGGACTTACAGCAACAGAGCAAAGCGTTGGACAAACTCACTGATCACGTCGAGGATCGCCAACTCGATTCCACTCGCGTCCAAGAGGCCATGGCTTCCATCGCTGCTTCTGCCGAAGCTGATCGCAATGCCATGCGCATCAGGGAAAAAGAATTGGCTGCTGTTAAGATAAATGCAGCAGATGTTGATATAATTGCAAATGAACTAGAGTTGGACAAAAAGGTTGCTGAAAGAACTTTGCGTGAGCATAAAGGTGATGCAGTTGCTGCTATTCGGCACTTGCTTCACTAG 333 0.4775 MEGGEEGLEMMVDSKDLQQQSKALDKLTDHVEDRQLDSTRVQEAMASIAASAEADRNAMRIREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRHLLH 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01304 110 Coils Coil 80 100 - -
Gma15g01304 110 CDD UBA_HYPK 69 109 IPR038922 -
Gma15g01304 110 Pfam HYPK UBA domain 69 109 IPR044034 -
Gma15g01304 110 Gene3D - 70 108 - -
Gma15g01304 110 PANTHER HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER 1 109 - -
Gma15g01304 110 PANTHER BNAA05G30770D PROTEIN 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01304 Gma-Chr15 11558219 11561069 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01304 - - gmx:100527445 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01304 15 11558219 11561069 Gma15g01304 15 11558219 11561069 ECH
Gma15g01304 15 11558219 11561069 Gma09g00317 09 2972968 2975445 GST
Gma17g00312 17 2513646 2514494 Gma15g01304 15 11558219 11561069 PCT
Gma15g01304 15 11558219 11561069 Gma17g00312 17 2513646 2514494 PCT