Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00304 ATGATGTTTTCCAATCTGATAGCATTGGAGCAGCACCAAAATGATAGCCAACCGTTTACATCTTATGTCTTTCTAATGAAAGCCTTGGTCTGCAATGAAAACGATGTGAAGTTGTTCCGCAACCGAGGGATTGTGATCATGGATAATTACACGGAGAAAGAAGTTTGTGATCTGTTTAAAAGGCTGTGTGGGGAAGTGGAATATGTGGAGGACAAGTTCTATTTTGCAGGGCTAATTGAACAAATTTTAGAGTATAAGAGAACTCCGAGATCGTGGAGGAAGATATTGAAATGCACACTTTGTGCTCCAACTCTATATTACATTTACAGGTTGCTTCTTGCTATGAAGAGAAAAAGGAGTACGGTTTCACATCAACCTCGGGCTAATGCTGATACACTATTTCAGAGTTACTTTGGTCAGCTGTCACCAGTAGAACCTTTTGGAAAACAAGCTGAGAATGAGAATGTCAAGGAAAAAATGGATGCTTCTGCTGGATTAGAAACTGGAAACAAATTGAAGAAGCTAAAGCTCAAGTTTAGGGGTGTTACTCATACTATTCATGCCAAGTCAAAGACAGAAACAGGCTTCAGCAGTGATTCTTTAATAAAAAAAATTTCTCCTTGTTCTGATTGTTCTAAGCCACATGATGATACAGATGGTAATTATGTTTGTCCTTTTGATAAGAGAAAAGGCCTTGGCAATAAATTGCTAATGCCCTCTGTAACTGAATCTGGTTTTACAGCAGAGAATCATTCACATAGAGGAAAGACCACCGGAGAAACTATAGATGTCAATCATGAGCATGTCTGTGAGAGCAAGCACATTACCAGGAGATGTGCCTTGAGTGTGGAATTTAGTGATGAAGATAATAAAGATGCAGAACTTCATTTTCTCAAAGACCCTGGAATACCGGGCTCAATTAAATATGGTAAAATGAAATTGAAATCAGGGAAGAAATATGAGGATTCAGACTATGTGGAAGAAGATCCAACATCAAGTGACGAGTCAATATCGGAGTGGAAGAAGCCAAAGAGGGAATCTGTTGATTTACTTGTACAAAGAGGGAATCATACTTGTTCAGTTGACTCATTGAAAGATGTTTTATCTGGGTCAGCTGCAAGCATTGCCGACATCTCAGATGCTTTAGTTCCCATGAAATGGAGCAACAAGTCAAGAAAGCTGAGGCTGCAGAGACGTAAAATTCAATCAGAGAAGGCAGCTCGGGAAGCTGAGGCAGCCGCCATCAGAAAGATACTTGGTCAAGAATCGGGTAGGAAGAAGAGAGAGGATAAGATGAAGAAGCACAGGGATGAATTTGTTAAGGAAAAATCTAACAAATCCTTCAATTTAGGATCAAATACTGTTAGATTGACCATGAGACCCCAAGGAACTGTAGTAACTTTTTCTGAAGATATTGGTCTACCGAGTATCTTCCAAATGGGAACTAACAGCTATCCTCCCGAGAGAAAAATGCTCTGGTCCAAACTGCACTGA 1494 0.3976 MMFSNLIALEQHQNDSQPFTSYVFLMKALVCNENDVKLFRNRGIVIMDNYTEKEVCDLFKRLCGEVEYVEDKFYFAGLIEQILEYKRTPRSWRKILKCTLCAPTLYYIYRLLLAMKRKRSTVSHQPRANADTLFQSYFGQLSPVEPFGKQAENENVKEKMDASAGLETGNKLKKLKLKFRGVTHTIHAKSKTETGFSSDSLIKKISPCSDCSKPHDDTDGNYVCPFDKRKGLGNKLLMPSVTESGFTAENHSHRGKTTGETIDVNHEHVCESKHITRRCALSVEFSDEDNKDAELHFLKDPGIPGSIKYGKMKLKSGKKYEDSDYVEEDPTSSDESISEWKKPKRESVDLLVQRGNHTCSVDSLKDVLSGSAASIADISDALVPMKWSNKSRKLRLQRRKIQSEKAAREAEAAAIRKILGQESGRKKREDKMKKHRDEFVKEKSNKSFNLGSNTVRLTMRPQGTVVTFSEDIGLPSIFQMGTNSYPPERKMLWSKLH 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00304 497 MobiDBLite consensus disorder prediction 320 340 - -
Gma17g00304 497 Coils Coil 393 413 - -
Gma17g00304 497 Pfam Plant protein of unknown function 1 97 IPR004158 -
Gma17g00304 497 Pfam PAPA-1-like conserved region 396 471 IPR006880 GO:0031011
Gma17g00304 497 PANTHER INO80 COMPLEX SUBUNIT B 113 489 IPR029523 GO:0006338|GO:0031011
Gma17g00304 497 PANTHER PAPA-1-LIKE FAMILY PROTEIN / ZINC FINGER (HIT TYPE) FAMILY PROTEIN 113 489 - -
Gma17g00304 497 SMART PAPA_1_2 387 472 IPR006880 GO:0031011
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00304 Gma-Chr17 2446934 2451414 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00304 - - aprc:113846788 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00304 17 2446934 2451414 Gma17g00304 17 2446934 2451414 ECH
Gma17g00304 17 2446934 2451414 Gma03g02028 03 45857442 45867336 ECH
Gma17g00304 17 2446934 2451414 Gma19g02064 19 49547303 49550427 ECH