Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00272 ATGATCGAAAGAAGCAAGGGCATTGTGGTCATAATGCAACTAAGCAAGCTTCTTGTTCCGGGAAAGGCACTTTCTCAGCGGTTCCTCTCACGTTTCTGTTTCAGACACTCCAACCAGATTCCAAACTCCAATTTTTATGTTTCCTTTTTTCTTCCATTTTCCCAAACCACATTGTTCTTCTCCGCCGATTCCATGACTGCCGGGGCAGTGGCGACGGCAGCCGGAGCGGCGGTGATGCTGTACCTCGTATTCCGGCGGAGGAGGAAGGCCGAAAAGGAGTGGTCGAGGTCGCGGACGACGTGGAGGTTGAAGCCAGCTCAGGCGCCGGCGAATATGTTAGAATCGATTGCGACGTTATCGGAGACGTTGAGGTTCACTTACTCGGAGACTATTGGGAAATGGCCAATCGCCGACTTGGCCTTCGGCATCAATTACTTGATGCGCAAACAGGGTGATTTGGcagttgcgagtgtgtatggtggaagcagttgtgtggagctgaaaggccctggagttgtagatgagttacaagagcttttgaggttgttgactttgtgcatgcttttctccaagaaaccgtttcccgagtttttagattctgccggattctctctagaccatgttcttcttcacaaccccgaagctgggcttctgaagcccgctttcacaattatacatgatacgcagtcaaaatgtttccttctattgatccggggaacccatagcataaaagacacactgacagctgcaactggtactgtggttccctttcaccattccattttaaatgatggaggaataagcaacttggttttaggatatgcacactgtggtatggttgctgcagctcgttggattgcaaaactctgcactcctacactacttaaagcccttaataaatgtccagactcagaagtcaagattgttggacactcacttggtggtggtactgcagcactattaacatatattcttagagaacaaaaagagttatcttcaagcacctgtgtcacatttgccccaggcatacatttcattgttgtcatttttgcagctgcttgtatgacatgggagttaggtgaatcagggaagcacttcatcactaccattataaatggttacgacttggtacccacattatcagcttcctctgttgatgatctccgatctgagGTTGCTGCGTCATCTTGGATGAGTGATTTATGGGATCAGGCCGAGCATACAAAGGTTCTGAAAGCCGTCCACAACTCAGCAACTGCACTTGGATCTCACTTACAATTCATATCTAGTGCAAAAGACAAGGTAGCTGGTGTAGGTGCTATTCTACGGCCTGTGACCAGTGGCACCCAGgttgtgatgaagcatgcacaaagtgttgtcgaagctgttgtcaaaactatggcttcacaccGACAGGTTGGTTTCAACATACCTGCTGTGGTTTATTTATAG 1452 0.2342 MIERSKGIVVIMQLSKLLVPGKALSQRFLSRFCFRHSNQIPNSNFYVSFFLPFSQTTLFFSADSMTAGAVATAAGAAVMLYLVFRRRRKAEKEWSRSRTTWRLKPAQAPANMLESIATLSETLRFTYSETIGKWPIADLAFGINYLMRKQGDLAVASVYGGSSCVELKGPGVVDELQELLRLLTLCMLFSKKPFPEFLDSAGFSLDHVLLHNPEAGLLKPAFTIIHDTQSKCFLLLIRGTHSIKDTLTAATGTVVPFHHSILNDGGISNLVLGYAHCGMVAAARWIAKLCTPTLLKALNKCPDSEVKIVGHSLGGGTAALLTYILREQKELSSSTCVTFAPGIHFIVVIFAAACMTWELGESGKHFITTIINGYDLVPTLSASSVDDLRSEVAASSWMSDLWDQAEHTKVLKAVHNSATALGSHLQFISSAKDKVAGVGAILRPVTSGTQVVMKHAQSVVEAVVKTMASHRQVGFNIPAVVYL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00272 483 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 65 473 - -
Gma17g00272 483 Gene3D alpha/beta hydrolase 204 431 IPR029058 -
Gma17g00272 483 Pfam Lipase 3 N-terminal region 105 180 IPR005592 GO:0016042
Gma17g00272 483 Pfam Lipase (class 3) 235 382 IPR002921 GO:0006629
Gma17g00272 483 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 65 473 - -
Gma17g00272 483 SUPERFAMILY alpha/beta-Hydrolases 207 383 IPR029058 -
Gma17g00272 483 CDD Lipase_3 191 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00272 Gma-Chr17 2197469 2201622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00272 65 469 Acyl Lipid Metabolism Gene Families AT4G16070 66.588 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00272 - - gmx:100801263 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00272 17 2197469 2201622 Gma17g00272 17 2197469 2201622 ECH
Gma17g00272 17 2197469 2201622 Gma09g00372 09 3485596 3491031 PCT
Gma09g00372 09 3485596 3491031 Gma17g00272 17 2197469 2201622 PCT