Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00372 ATGCCTCACCCTTCCCAATTTACCCTTACATTATCCCCAAATATCCCAAATAACCAAGGGCATTATGGTAGTCATGTCAAAACAGTAACACCCAGCTTCTTGTTTCTGATGATGTGTTTCCAAGTGGGTAACCTTCCCCATAAAGAGAAAGAACACCCCATTTTCTGTTTTTCTCTGTTACGTTTCAGATTTCACTTCTTAAGCCCAAAATTTATCATATTTTTCCAAACCCCATTATTATTTCCTCCTCCAAAAAACTCGTTCCCGTTTTCTTCATTCGTCGCGTTATTTTTTCGATTCTTGAGGCGCGTGGCCGATCTCTGGCGGTGCATGGCGGCGGGGACAATGGCGACGGCGGCCGGCGCGGCGGTGATGCTCTACTACGTGTTGAGCCGGCGGCTGGCGCGGAAGGAGGAGGACGAAGGCGAGGATCACGGCGGCGAGGTGTCGAAATCGAGCAGATCGGTTCGCCGGAGAAGGATTTCACGGCGGCCGGCGCAGGCTCCGGCGACGCTGCTGGAATCAATCGTGACGCTGTCAGAGACTTTAAGGTTCACTTATTCCGAGACTCTCGGGAAGTGGCCCATCGGCGATTTGGCCTTCGGCATCAACTACTTCATGCGCAAGCAGGGTAATTTAGCTGTTGCAAGTGTGTATGCTGggagtgattgtgtgcagctcaaaggggatgagataattgtggagctctatgagttgttgaggcttttaactttgtgtatgcttttctccaagaagccatttcctgtgtttttagattctgctgggttttcccttgatgatgtgctcattcagaagccaaaagctgggcttctgaagcctgcatttaccattatacgtgatacacaatcaaaatgtttacttctattgatccggggtactcatagcataaaagacacactgacagctgcaactggtgctgttgtccccttccaccattcagtgttaaatgatggtgggataagcaacttggttttaggatatgcacactgtggtatggttgctgcagctcgttggattgcaaagctctgcactcctaccctacttaaggctcttggtgaatgtccacacttcaaagtcaagattgttgggcactcacttggtggtggtactgctgcactgttaacatatattcttagagagcagaaagagttctcttcaagcacgtgcgtcacatttgccccagctgcttgcatgacatgggagttagcagaatcaggaaaacactttatcactaccatcatcaatggttctgacttggtgccaacattctcaacttcatctattgatgatctccgttctgaggtcactgcatcctcttggttgaatgatctacgggatcaggttgaacatacaaaggtcctgaatgttgtttaccgctctgcaactgcacttgggtctcgcttaccatctatatctagtgcaaaagctagggtagctggtgctggtgctattctgtggccagtaaccagtggcactcaggttgtgatgaagcgtgcacaaagtgttgctgaagctgttgtcagaactcgctcatcattgtcatcatggtcttgcatgagtgcccggcgtcgaaatgtgggtccatcagtaaactctaaaactgaggacttaactgaaacctctctaatatccgagagaagcactgattctcacatgactgaagaggtagtaagagaacctatgcttaaggacgaaagtacttcctcaagtggaggatctggccatgatgacactgatgaagaggaacaactcattcctgctaatgaagacattactGCGTCTGCCGTTGACGACTTCACAGAAGGCCAGTTATGGTATGAACTGGAGAAGGAGCTTCAGAGACaggataatactatgaacattgatgctcaagaagaggctgcagcagcaaaagagatcacagaagaagagaatcaactggttgatgctgctgcagaatgcagttgcagttcaatcacaacatcagacaacttggacagccatcgattttatccccctggcaggatcatgcacattgtctccgtacctttgtcggatgagtcaaattcaaatcctgatgaccctttagaagaacatgtcggcttatatgaaacacctagagagctgtacagcaaactcagactttcaagaaccatgatcaatgatcattacatgccaatgtataagaagatgatggaactattaatccgagaactagagaaagaAGGCAGCTGTAATGTTTTGGATTAA 2250 0.1698 MPHPSQFTLTLSPNIPNNQGHYGSHVKTVTPSFLFLMMCFQVGNLPHKEKEHPIFCFSLLRFRFHFLSPKFIIFFQTPLLFPPPKNSFPFSSFVALFFRFLRRVADLWRCMAAGTMATAAGAAVMLYYVLSRRLARKEEDEGEDHGGEVSKSSRSVRRRRISRRPAQAPATLLESIVTLSETLRFTYSETLGKWPIGDLAFGINYFMRKQGNLAVASVYAGSDCVQLKGDEIIVELYELLRLLTLCMLFSKKPFPVFLDSAGFSLDDVLIQKPKAGLLKPAFTIIRDTQSKCLLLLIRGTHSIKDTLTAATGAVVPFHHSVLNDGGISNLVLGYAHCGMVAAARWIAKLCTPTLLKALGECPHFKVKIVGHSLGGGTAALLTYILREQKEFSSSTCVTFAPAACMTWELAESGKHFITTIINGSDLVPTFSTSSIDDLRSEVTASSWLNDLRDQVEHTKVLNVVYRSATALGSRLPSISSAKARVAGAGAILWPVTSGTQVVMKRAQSVAEAVVRTRSSLSSWSCMSARRRNVGPSVNSKTEDLTETSLISERSTDSHMTEEVVREPMLKDESTSSSGGSGHDDTDEEEQLIPANEDITASAVDDFTEGQLWYELEKELQRQDNTMNIDAQEEAAAAKEITEEENQLVDAAAECSCSSITTSDNLDSHRFYPPGRIMHIVSVPLSDESNSNPDDPLEEHVGLYETPRELYSKLRLSRTMINDHYMPMYKKMMELLIRELEKEGSCNVLD 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00372 749 Gene3D alpha/beta hydrolase 266 467 IPR029058 -
Gma09g00372 749 Coils Coil 633 653 - -
Gma09g00372 749 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 111 742 - -
Gma09g00372 749 SUPERFAMILY alpha/beta-Hydrolases 266 433 IPR029058 -
Gma09g00372 749 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 111 742 - -
Gma09g00372 749 Pfam Lipase 3 N-terminal region 160 234 IPR005592 GO:0016042
Gma09g00372 749 MobiDBLite consensus disorder prediction 531 588 - -
Gma09g00372 749 MobiDBLite consensus disorder prediction 140 155 - -
Gma09g00372 749 MobiDBLite consensus disorder prediction 531 554 - -
Gma09g00372 749 CDD Lipase_3 286 437 - -
Gma09g00372 749 Pfam Lipase (class 3) 295 431 IPR002921 GO:0006629
Gma09g00372 749 MobiDBLite consensus disorder prediction 555 569 - -
Gma09g00372 749 MobiDBLite consensus disorder prediction 140 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00372 Gma-Chr9 3485596 3491031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00372 111 740 Acyl Lipid Metabolism Gene Families AT4G16070 66.063 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00372 - - gmx:100812454 1365.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00372 09 3485596 3491031 Gma09g00372 09 3485596 3491031 ECH
Gma17g00272 17 2197469 2201622 Gma09g00372 09 3485596 3491031 PCT
Gma09g00372 09 3485596 3491031 Gma17g00272 17 2197469 2201622 PCT