Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00249 ATGGCCGTCGTAACCAGCAACGGCAAGCGCCGCCAACATTGGCCATCCGCGAATTACCACTTTCCATCTCCCAATTCCAAAAGACCCAGAGTTTCAACAATGTCCCAAAACCACGCGCAATCCTTGTTATCCTCGACTAGTATCATTTCAAGAATCTCTAAGTACCCCGAAACCAAGCCACCACTGCATAGGGAGGTTCACGCCCCGTGTAGACCACGTAAGTTTGATTCTCCTGCCTTCAATAGAAGTTTTCATTATCCTCGCAAAGAAGAGATTAGTTACGACAAGGGCAACGTGCTCAGTAAAAACTACCAAAGGGCGAAAAATTCTGCGTTGGCTAGCATTAGGTTTGGGGAAAAGGGCAAGGAGGTGATAGAAGTGGATGCTGATAGTTCCAAGGGTATGGTGTCGGAGGATTCGAGTGTGGAAGAAGATGGACGAGAGCACAAGTGGCAAGAAGGTGGTGATTTGGTTGTGACTGAGGTGAAGGATTTGGATGCTAATAAGGATATGCATGGTGTCCCTCAGCAGCAGTCAACTTCTTCCGTTGTTTCTGAGTTGACTAACGGTGATCTGAATGTGGTTAATGCTGAGAAGATGTTGGACACTCTTTCTTTGACTCCTGAGCATGATCTTTCCTCCGTTCAAGCCTACAAGAAGTTGCTCGATGCTCTTGGCCAACGAAATGATACGCTTGAGAGGCTGAAGGCTGAAATTCAAGTTAACGAGAAGCGTATGTCCACATTTGAATTGTTGCGCCCAAAGAAGGAACTAGTTGAGGAAGTTCCATTGGAACCTTTTATTCCTCTTACTAAAGAGGAAGAAGTTGAGGTTGCACATGCCTTTTCTGCCGACAGGAAAAAGATCTTGGTTTCCCATGAGAAATCTGGCATTGAGATCTCTGGAGAAAAGTTTCAATGCCTTAGACCGGGTGCATGGTTAAACGATGAGGTAATAAATATGTACCTTGAATTGCTGAAAGAGAGGGAGAGAAGAGAACCACTGAAGTTTCTGAACTGTCATTTTTTCAATACCTTTTTCTACAAAAAGttaataagtggcaagaatgggtatgatttcaaatctgtgaggagatggaccagccaaaagaaattgggatatggcctacatgaatgtgataaaatatttgtacctattcataaagagattcattggtgcttggctgttatcaataagaaagataagaaatttcagtatctggactcactgagaggaACAGATGCCCGAGTGATGAAAATTCTGGCTAGCTATATTGTAGATGAAGTAAAGGACAAGACTGGAAAAGATATTGATGTAAGTTCTTGGAAAAAAGAATTTGTTGAAGACCTTCCTGAGCAGCAGAATGGGTATGATTGTGGGGTGTTTATGATCAAATATGCTGACTTCTATAGCAGAAACTTGGGGTTGTGTTTCAACCAGGAACACATGTCTTACTTTCGGCGCAGAACAGCTAAAGAAATCTTGAGATTAAAAGCTAACTAA 1503 0.3806 MAVVTSNGKRRQHWPSANYHFPSPNSKRPRVSTMSQNHAQSLLSSTSIISRISKYPETKPPLHREVHAPCRPRKFDSPAFNRSFHYPRKEEISYDKGNVLSKNYQRAKNSALASIRFGEKGKEVIEVDADSSKGMVSEDSSVEEDGREHKWQEGGDLVVTEVKDLDANKDMHGVPQQQSTSSVVSELTNGDLNVVNAEKMLDTLSLTPEHDLSSVQAYKKLLDALGQRNDTLERLKAEIQVNEKRMSTFELLRPKKELVEEVPLEPFIPLTKEEEVEVAHAFSADRKKILVSHEKSGIEISGEKFQCLRPGAWLNDEVINMYLELLKERERREPLKFLNCHFFNTFFYKKLISGKNGYDFKSVRRWTSQKKLGYGLHECDKIFVPIHKEIHWCLAVINKKDKKFQYLDSLRGTDARVMKILASYIVDEVKDKTGKDIDVSSWKKEFVEDLPEQQNGYDCGVFMIKYADFYSRNLGLCFNQEHMSYFRRRTAKEILRLKAN 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00249 500 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 1 144 - -
Gma17g00249 500 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 151 499 - -
Gma17g00249 500 Coils Coil 215 252 - -
Gma17g00249 500 Pfam Ulp1 protease family, C-terminal catalytic domain 313 494 IPR003653 GO:0006508|GO:0008234
Gma17g00249 500 ProSiteProfiles Ubiquitin-like protease family profile. 298 470 IPR003653 GO:0006508|GO:0008234
Gma17g00249 500 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 151 499 - -
Gma17g00249 500 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 1 144 - -
Gma17g00249 500 Gene3D Adenoviral Proteinase; Chain A 258 498 - -
Gma17g00249 500 SUPERFAMILY Cysteine proteinases 266 499 IPR038765 -
Gma17g00249 500 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00249 Gma-Chr17 2023523 2028707 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00249 K08592 - gmx:100797013 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00249 17 2023523 2028707 Gma17g00249 17 2023523 2028707 ECH
Gma17g00249 17 2023523 2028707 Gma09g00411 09 3857251 3862511 PCT
Gma09g00411 09 3857251 3862511 Gma17g00249 17 2023523 2028707 PCT