Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00411 ATGGGTGCGATGACCGCAAACCGGAAGCGCTCCGAAGAATGCATGAACGTAAACCACACAAATTCCGATTCTCCGAGAAAACACGCCAAATTCTCGATCAAACCCGTTCCGTCCGCCACCAGCGCCGTCGCGAGACTCTCCCGGTACCCAGAGGTTCACGCGCCGTTGGCGAGGGAGGTTCACGCGCCGTGCCGGTCGCGAAAATTCGAACGCTCTAGGGTTATTGTCAGTGCCGGCGACGTCATGGGGAACTTTCTGGCAACGAAGTTCAAGGAGGCGAAGCGTTCGGCGTCGGCGAAATGCAGGAACCTGGTGGAGAAGGGGAAGGAGGTGATTGAGGTGGACGCAGAGACGGAGAGTGAAGAGCGTTACGTGGATTCGAGTGTGGAAGAGGCGCGTGGCGATGGTGACAAGGTTGTCAGGGTTCAGCAGCAGTCGCAGTCAACGTTGTCGTTTGATTCGGAGATGATGAATGCGGAGTTGAAGATGGTGAGTGGTGGGAAGGTGTGGGGTTATGAGACGCAGCGTGATTTGGAAAATGTTCATATGTATAAGAAGTTGCTTGAGGATGTTGGGAGGAGAAGTGGCACGCTTCAGAGGCTGAATTTTGAGATTGATTTGAATGAGAAGCGCAGGGAACATTATAATTTGTTGCGGCCGAAGAAGGAATTGGTTGAGGAACAGGAAGTGCCGCAAGAGCCTTTTGTTGCTCTTACAAGTGAGGAGGAAGATGAGGTTGAATGTGCCTTTTCTTCCAACCGGAGGAGGATCTTGGTTACCCACGAGAATTCTAACATTGTGATCACGGGAGAGAAGTTTCAGTGCCTTAGGCCCACTGGATGGTTAAATGATGAGGTTATAAATTTGTACCTGGAATTGCTTAAGGAGAGGGAGCAAAGAGAACCACAGAAATTTCTGAAATGTCATTTTTTCAATACCTTTTTCTACAAAAAGttaataagtgggccgaaaggttatgatttcaaatctgtcagaagatggacaacccaacggaaattgggatacagtctacttgaatgtgataaaatatttgtacctatccatcaagagatacattggtgcttggcagttatcaataagaaagataagaaattccagtatcttgactcaatgaaaggaGAGGATAGTTTTGTGCTAGAAAAGCTGGCTAAATATTTTGCGGATGAAGTAAATGACAAGACTGGAAAACATATTGATGTAAATACCTGGAAAAAAGAATTTGTGAAAGACCTTCCTGTGCAGAAAAATGGGTATGATTGTGGGGTGTTTATGATCAAATATGCAGACTTTTATAGCAGGGGTCTGGAATTGTGTTTTAACCAGGAAAACATGTCCTACTTTCGGCGTAGGACGGCTAAGGAGATCTTGAGATTGAAAGCTGAATGA 1407 0.4129 MGAMTANRKRSEECMNVNHTNSDSPRKHAKFSIKPVPSATSAVARLSRYPEVHAPLAREVHAPCRSRKFERSRVIVSAGDVMGNFLATKFKEAKRSASAKCRNLVEKGKEVIEVDAETESEERYVDSSVEEARGDGDKVVRVQQQSQSTLSFDSEMMNAELKMVSGGKVWGYETQRDLENVHMYKKLLEDVGRRSGTLQRLNFEIDLNEKRREHYNLLRPKKELVEEQEVPQEPFVALTSEEEDEVECAFSSNRRRILVTHENSNIVITGEKFQCLRPTGWLNDEVINLYLELLKEREQREPQKFLKCHFFNTFFYKKLISGPKGYDFKSVRRWTTQRKLGYSLLECDKIFVPIHQEIHWCLAVINKKDKKFQYLDSMKGEDSFVLEKLAKYFADEVNDKTGKHIDVNTWKKEFVKDLPVQKNGYDCGVFMIKYADFYSRGLELCFNQENMSYFRRRTAKEILRLKAE 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00411 468 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 181 467 - -
Gma09g00411 468 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 1 179 - -
Gma09g00411 468 Pfam Ulp1 protease family, C-terminal catalytic domain 281 462 IPR003653 GO:0006508|GO:0008234
Gma09g00411 468 SUPERFAMILY Cysteine proteinases 235 466 IPR038765 -
Gma09g00411 468 Gene3D Adenoviral Proteinase; Chain A 224 466 - -
Gma09g00411 468 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 1 179 - -
Gma09g00411 468 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 181 467 - -
Gma09g00411 468 ProSiteProfiles Ubiquitin-like protease family profile. 266 438 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00411 Gma-Chr9 3857251 3862511 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00411 K08592 - gmx:100802161 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00249 17 2023523 2028707 Gma09g00411 09 3857251 3862511 PCT
Gma09g00411 09 3857251 3862511 Gma17g00249 17 2023523 2028707 PCT