Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00225 ATGCAAGCCAATATTGAGTTCGAGGAAGGAGAGGCTTTCTTCTGTTATAAGGATGATGATGACGACGACAACACTGACCTTGATTCTCTCTCTTACATTGATGAGAGGATTCAGCATGCTCTGGGTCATTTTCGAAAGGAATTTGAAGGAGGTGTTTCTGCTGGCCGTTTGGGTGCAAAATTTGGTGACTATGGCTCCTTTTTACCTACCTGTGAACACTCTCCTCCTTTGCGATCTTGTTCAAAGACTCCACAAAAGCACAATAGTTCACCAAAATCTCCTAGCAATCTCCACATGGCGGCTGCATTTCGTAACTCAAAAGCACTTCCAAATATGCCTTTTTCTATGAGGGTTGGAACTGCTTCCTATGAAGCTCCACCATTTCGTAATATAAGAGTACCTTCAGCAGATTACTCAGTAAAGAACACAGATATTTCCTCCAATGAAGTAATAGAGAAGTTCACTTTGAAAGACTGTGCAAATAAGTCAGAAATTTTGACTGACCAAAGAACACTGAAGTTGCGAATCAAAGTGAAATCAGATATCTTGGCAAAAAAGAATGCAGCAATTTATAGTGGTCTTGGACTCGATGACTCTCCATCTCCATCAATGGAGAACAGCCATGAGGAAAGTGAAGATATGCCACATGTATCTCAAGAAACCCCTGAAGAATCTCCAACCAGCATTGTTCAGGTTATGACTTCTTTCACTATCCCTGGAGGTGTGCTAATATCACCTCTACATGACAGTCTCCTGTACTTGATAAGAAAGGAAAAAGCTCTTGGAAACATCAAACCCATGTCTTCTCTTAATGGTAATTCCGTGTCTATTAATGAATCAGATTCTTTTGTGGGGGATGGACATTTGTTGAAGAAAAGGAAAGTGACAGTGGTGGACCAAAGTCACAAGCAGCATATGAATGGTAACTGTTCTGAGAATGATATGACATTGCATACGAAGAAAAAATTAGGAAATAGAACTCCGGATCGTAAGGACTTTCTATCTAATGACCTGAGATGCACTCCACTGTCAAGCTCAATTTGTGATGCTGGTGAAACAGCTGAAGTCACTGTTAAGGGTTTTGAAGTATCCAAGGAGGTTGATGGTGTGAAATGTAGAATGGTTTCCACTGAAGCAGTGAAGGAGGATTCACTAGAGTCAATATCTGGTCAGGATTTTGACAAGATTGAGAAGCAAAATACAGGGAGTGGCTTTATGAAAAATGTTTTAGAGCATAAAATGATAATTTCTCAGAATAATAATTCTACTAATCCTAAGACTAATAGCAAGTGTAACACATTTGCAATTTCAAAAAGGATCAAGTGTGATGCATTGAAATGTAAGGTGGATCAAGATACTCAAAAGTGTGAAACTAATCAGGAAGGAAAGGTGAAATCTGAAAGCAAGAATGAGTCAAAAGGTGAAAGGAGTCCTGGAAATGTTATGACTCTTGCTGAAAAAGATAGCATTGGTACTAGTAATAATGCAATGGTAAATGATAGAAAGAGAACAAGCATTGATGTTACTTCTTTGAAAAGTAAAATGCATAAAATAAAGTCACTGAAGGTTAATAAGGTCAGAGATTGTGACAGAGATTCATTGAAAGGAAAAAAATCACAACAGAAAGTTGATAGAATAAATCCAACTGATGGGCCTACTCTTAATAAGGCCACAGTAAATTCTAGCCTTGATCACGTTGATAAGAGTGCATATAGGGTTAAAGGAAATGAAAGACCAAGTGGCAATAAAGTTGTTAACCAGTTGTCAGCTGGGCCATGTGTAAAAGATGCACCAGGTGCATTTCCTATTGCTGAAAATAAACCAACTTCTGAAATGGTTCTGTCATCAGAAGCAGCAACACCTCAAGTTATCGAAGAAGATTGGGTATGCTGTGACAGTTGCCAGAAATGGCGGCTTCTACCTATGGGTTTAAAGCCTGAGCAGCTTCCAGAGAAATGGTTGTGTAGCATGCTATATTGGCTGCCTGGAATGAATCGGTGTAACATCAGCGAGGAGGAGACAACAAAAGCACTTTATGCTTTGTATCAAATGCCAATTTCTGAGGGTCAAAATAACATGCAAAGCCATGCCGCTGGACCTGAAACTGGAGTGGGATCTGTTGATGCTCTGCAACTTGGCCTGAATCGCAAAAAGTCCAGTTCTGATGTAATGCTTGATCGAGGAAAGAAGAAACATGGTATTAATGAAAAGACAAGGTCAGGAGTCAATAATGACATGCATCGGTTGTCAAATAATGCTCAAGAGTCTGTTAAAAATAGAAGCTTGAATGAGATGAATAAGCAGTCTACAGACTCAAACCGTATAAAGAAATCTATTTCTAAACATTCAAGCAGGTTGAACAATTTGATAGAAGAAAAAAACACACCTAAGGTGAAAGAAAAGCAAATGAATGGAGGTGACAGAAATCATGTTAGATTGAAACGTAAGATGGAGGATAATCAACATGGATCTGGAACTCCTAAGAAATCTAAGGCTGAAGATGTTTGCTATGCTGATAAACCACTGAATCCTGGCATGGAATTTAAAAAGGTGGGTCTAATCTCAAGAAATAGTTTACCAACAAAGGCTAGTGGGAGAAATATGAGGAAATATGATGATTATTGTTGGTCTGATGATCTAGTGGACAAGTTGGTAGTTCCAGTGAAGAAAGGAGACCGGGCACAGTTTTCATCAGATGATGGTTCATTGGATGCTACAAACACCAGAAAAAGTGGTTCAATTAAGAAAAGGAAAATGGCCGATTGGCTGGATAATGAGAAACATAACAAAACATTGTCCTTGGAAGGCAATATGCAATGTGGTAAAGAAGGGAATGCAAATAAGAAGGAGAAGAAGTATATAGTTTTGAATACGGAGGCAAAATCAGTAACTGAAAGGGATGATAAATTGATTAGAGAAAGTGGGATGAAGCGAGTTTTCTCTTCAGACAGCAGGGACGAAATGGCTATTGGGACAGAGGTGAAAAGTGTTAATAAGGTCCAGCAGCCAAGAAAGCACAACAAAATTGTTGCTTCTTACCAAGCTTTGGATTGTTTTGATCCATTGAGTAAGGATTTAGGCTCTGGACAGCTTTCATTGGCAGCAACTTCAAGCTCTTCTAAGGTTTCAGGGTCTCATAAAGCTAGAACTAACGTTGAAGATGTCAGAGGCTCACCTTTAGAATCTGTTACCTCATCACCTTTGTGGACCTCCAACATGGACAAGCATATTTTGGAATCAGGGGACACATCAGAAAAACATGATACTAGAAAAGGTGGTCTTTCAAAAAGTTTGAATAATAGGGAGGGGAAGTTATCAGTAAAAATGAAGGAGAGAATTTCATATGACATTCATCCTGCACATGGTAATTATGGAAGCAGTTCGCATCATGAGGAGAAAGTGAACAAGAGTAATAAGGAAGATGCACTTTCTTGGCAGAAATCTGGTAGGGTTACATCATTACGGGTTAAGGAAAAGGACAGAATTTCTGGTTCTGAGGTTAGTAGGGAGAAGATGAAGGTTTCAGCTTCAGATAATGATTTTCACAAAAATGGTGTGAGTTATGAGTCAGCAGTTGATCCAAATCGTCATGCTTCTGATACTGAGACAAGAAATGATGTTAAGAACAGTTCTCTGAAGTCTAATCACAAGATTGACAACCCTAGTAAGAAAAATTCTTCAAGGCATTGGTCAAATGAAGCTGGAAAACAAACTGTGCTAAAACAAAAAGATTTTGGGAATTCAGTTCTGAAAGATAAAGTGAAAAGGGAAACATTATATGTGGGTTCTAGAACTGCACCTGAGTCGCAAAGGGGAGATATGTCTGATGGGCACCCATTCCATGCATCTGGCAATGATGTTCCCAAGTTTGTGAGAAATCCAGTTGATGTTAGTTGCAAGGTTGGATTTAATTGCAGTTCAGAAAGTTTCATACCTGATGGACAACTCAGTGAGTCAGGTCCTGTGACAACAAATTCTAGCAAAACTGCCACTAGCATTCTGGAAGAAGCCACAAAGCTAAAAGATTCTGCAGATCATTATAAGAATTCTGGGTTTGAGTTTGAAAGTAATGAGACTTATTTTAAATCTGCCTTGAAGTTTCTGCATGGAGCATCACTTCTAGAAAGTTCTCATGGTGAGAGTAGCAAGCATGGAGAGGCGAGTCAAATGCAAATATATGCCACTACAGCTAAACTTTTTGAATCCTGCGCCCATAAATATGAAAAACGCCAAGAAATGGCTGCAGCTGCTTTGGCATATAAATGCTTGGAGGTGGTATACATGAGACTGGTTTACTGTAAACATTCTAGCATAAACAGGGATCGGCATGAGTTGCAATCAACTCTACAAATGGTTTCTCAAGGTGAATCTCCTTCGTCTTCTGCATCTGATATTGATAATTTAAATAACCTGGCGGTAGCGGACAAGGCTACTTTGACAAGGGGTTCTAATACTCATGTTCCTAGCAATCAAGTCATATCTGCTCGGAATCGCCCAAATATTGTCAGGCTTCTTGATTTTACTCAAGACATAAATCTTGCAATGGAGGCTTCTAGAAAATGCAAGACCACTTACATGGCTGCTAGTTTGAACATGGAAGATTCATGGAATAGGGATTGCATAACTTCTATTAGGAAGGTTGTTGATTTCAGCTTCCAAGATGTAGATGAGCTTGTACATTTGGTTTTGACTGCAACAAAAGCAATTACTTGTGCTGGTGTCCTGAAAGGAAGTGGCTTAAGGGTATCTACCTATGCTGACACCTGGAAACCTGCAAAGAGGGCAGGAAGAGCTATATGTGTTTCATTCAGGGTTAGAGACTGGACTATGATACACTCAATTTGA 4845 0.3926 MQANIEFEEGEAFFCYKDDDDDDNTDLDSLSYIDERIQHALGHFRKEFEGGVSAGRLGAKFGDYGSFLPTCEHSPPLRSCSKTPQKHNSSPKSPSNLHMAAAFRNSKALPNMPFSMRVGTASYEAPPFRNIRVPSADYSVKNTDISSNEVIEKFTLKDCANKSEILTDQRTLKLRIKVKSDILAKKNAAIYSGLGLDDSPSPSMENSHEESEDMPHVSQETPEESPTSIVQVMTSFTIPGGVLISPLHDSLLYLIRKEKALGNIKPMSSLNGNSVSINESDSFVGDGHLLKKRKVTVVDQSHKQHMNGNCSENDMTLHTKKKLGNRTPDRKDFLSNDLRCTPLSSSICDAGETAEVTVKGFEVSKEVDGVKCRMVSTEAVKEDSLESISGQDFDKIEKQNTGSGFMKNVLEHKMIISQNNNSTNPKTNSKCNTFAISKRIKCDALKCKVDQDTQKCETNQEGKVKSESKNESKGERSPGNVMTLAEKDSIGTSNNAMVNDRKRTSIDVTSLKSKMHKIKSLKVNKVRDCDRDSLKGKKSQQKVDRINPTDGPTLNKATVNSSLDHVDKSAYRVKGNERPSGNKVVNQLSAGPCVKDAPGAFPIAENKPTSEMVLSSEAATPQVIEEDWVCCDSCQKWRLLPMGLKPEQLPEKWLCSMLYWLPGMNRCNISEEETTKALYALYQMPISEGQNNMQSHAAGPETGVGSVDALQLGLNRKKSSSDVMLDRGKKKHGINEKTRSGVNNDMHRLSNNAQESVKNRSLNEMNKQSTDSNRIKKSISKHSSRLNNLIEEKNTPKVKEKQMNGGDRNHVRLKRKMEDNQHGSGTPKKSKAEDVCYADKPLNPGMEFKKVGLISRNSLPTKASGRNMRKYDDYCWSDDLVDKLVVPVKKGDRAQFSSDDGSLDATNTRKSGSIKKRKMADWLDNEKHNKTLSLEGNMQCGKEGNANKKEKKYIVLNTEAKSVTERDDKLIRESGMKRVFSSDSRDEMAIGTEVKSVNKVQQPRKHNKIVASYQALDCFDPLSKDLGSGQLSLAATSSSSKVSGSHKARTNVEDVRGSPLESVTSSPLWTSNMDKHILESGDTSEKHDTRKGGLSKSLNNREGKLSVKMKERISYDIHPAHGNYGSSSHHEEKVNKSNKEDALSWQKSGRVTSLRVKEKDRISGSEVSREKMKVSASDNDFHKNGVSYESAVDPNRHASDTETRNDVKNSSLKSNHKIDNPSKKNSSRHWSNEAGKQTVLKQKDFGNSVLKDKVKRETLYVGSRTAPESQRGDMSDGHPFHASGNDVPKFVRNPVDVSCKVGFNCSSESFIPDGQLSESGPVTTNSSKTATSILEEATKLKDSADHYKNSGFEFESNETYFKSALKFLHGASLLESSHGESSKHGEASQMQIYATTAKLFESCAHKYEKRQEMAAAALAYKCLEVVYMRLVYCKHSSINRDRHELQSTLQMVSQGESPSSSASDIDNLNNLAVADKATLTRGSNTHVPSNQVISARNRPNIVRLLDFTQDINLAMEASRKCKTTYMAASLNMEDSWNRDCITSIRKVVDFSFQDVDELVHLVLTATKAITCAGVLKGSGLRVSTYADTWKPAKRAGRAICVSFRVRDWTMIHSI 1614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00225 1614 MobiDBLite consensus disorder prediction 76 97 - -
Gma17g00225 1614 MobiDBLite consensus disorder prediction 1078 1106 - -
Gma17g00225 1614 MobiDBLite consensus disorder prediction 1057 1077 - -
Gma17g00225 1614 MobiDBLite consensus disorder prediction 456 481 - -
Gma17g00225 1614 Gene3D - 615 677 - -
Gma17g00225 1614 PANTHER CW-TYPE ZINC FINGER 1 1573 - -
Gma17g00225 1614 MobiDBLite consensus disorder prediction 456 474 - -
Gma17g00225 1614 MobiDBLite consensus disorder prediction 1035 1106 - -
Gma17g00225 1614 MobiDBLite consensus disorder prediction 1195 1230 - -
Gma17g00225 1614 MobiDBLite consensus disorder prediction 1152 1178 - -
Gma17g00225 1614 MobiDBLite consensus disorder prediction 203 219 - -
Gma17g00225 1614 ProSiteProfiles Zinc finger CW-type profile. 622 675 IPR011124 GO:0008270
Gma17g00225 1614 MobiDBLite consensus disorder prediction 1261 1285 - -
Gma17g00225 1614 PANTHER CW-TYPE ZINC-FINGER PROTEIN 1 1573 - -
Gma17g00225 1614 MobiDBLite consensus disorder prediction 194 224 - -
Gma17g00225 1614 Pfam CW-type Zinc Finger 628 673 IPR011124 GO:0008270
Gma17g00225 1614 MobiDBLite consensus disorder prediction 720 743 - -
Gma17g00225 1614 MobiDBLite consensus disorder prediction 718 746 - -
Gma17g00225 1614 MobiDBLite consensus disorder prediction 1125 1140 - -
Gma17g00225 1614 MobiDBLite consensus disorder prediction 545 562 - -
Gma17g00225 1614 MobiDBLite consensus disorder prediction 1118 1244 - -
Gma17g00225 1614 MobiDBLite consensus disorder prediction 531 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00225 Gma-Chr17 1851129 1861186 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00225 - - gmx:100793863 3047.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00225 17 1851129 1861186 Gma17g00225 17 1851129 1861186 ECH
Gma17g00225 17 1851129 1861186 Gma15g01438 15 13000497 13012676 PCT
Gma15g01438 15 13000497 13012676 Gma17g00225 17 1851129 1861186 PCT