Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01438 ATGGCTGATTTGAGGAATAATGTCAAGAAAGATTCCAAGAGTCTAAAGTATTGGAAACAAAAGCCTCTTATTAACTTGACGTGCGAGGCCGTGTGCGTGAACATAATCTTGAAGTGCTTCTTCCACATTAGGGTTATATCATGGCATGATCACTGTGCAAATAATCGCTTTTCCCTTCTGGGTTTTCGAGGGTTTCGCGTTTGCTTCGTTGGGCCTAGGGCTAGAAAGTTTTGGTGGATGGTGGAGATGAAGGAAAATACTGAGCTTGAGGAAGGAGAGGCTTGCTATTATAATGGTGACGATGAAGCCAACATTGACCCTGATTCTTTCTCTTACATTGATGAGAAGATTCAACATTTTCTTGGTCATTTTCAAAAGGACTTTGAAGGTGGTGTATCTGCTGAGAATTTGGGTGCAAAATTTGGTGGCTATGGTTCCTTTTTACCTACCCAAGAGCGCTCTCCTTGTTTATGGTCTCATCCAAGGACTCCACAAAGAAACCACAGCTCATCAAAGTCTAATATCAATCTCCACATGGAGGTTGTGTCTCATAACACAAAAGCATCTTCAAATGTGCCTCATGCAAGGCCTGAAAATGCTTCTCATAGTTCTTATTCACTTCGTGATTTAAGAGAAGCTTCAGTAAATGACTCAGTGAAGAAAGAACGAGGAATTTCTTCCAGTGATACAGCTGAGAGGTGCACTTTGAAAGATGATACTACAAAAAAGACAGGAAATTCAACTGACCAAAGGCCACTGAAGTTTCGAATTAAAATGAAATCTAATATCTTAGCACAAAAGAATGCTGAGATATATAGTGGCCTTGGGCTTGATAACTCTCCCTCTTCCTCAATGGGGAACAGCCCTGTGGAAAGTGAAGGCATGCCACCAGTGTCTCAAGAGAATGCTGAAGGTTCTCCAACTGGCATTATTCAGGTTATGACTTCCTTTCCTATCCTTGGGTGTGTCTTAGTATCACCTCTACACGAAAGTTTGCTCTACATGATGAAGAATGAAAAAGTTATTAGCGACAGCAAATACTTGTCTTCTCTTAAAGGTCATCAAGATACTTGTTCCATGTCTACTGATGAATCAGATTCTTTTGTGGGAAATGAACATTTGAAGAAGAGGACAGTGAGAATAGTGAGACAAAGTGAAAAACAGTTGGAATTGAAGCATACAAATGGCACCTTTTCTGAGAAGGATTTGACATTGCATACAAAGAAAAGATTAGGAAACAGAACGCCAGATTGTAAAGATTTTCTCTCTAATGACTTGAAATGTACACCTCTGTCAAGTTCAATATGTGATGCTGGTGAAACAGCTGAAGTCACTGCCAAAGCTTTTGAAGCCTCCAAGGAGTTTAATGAGAATGGGGTGCAAGGCAGAATGGTTCCTGTAGAAGCTTTGAAGGAGGAGTCGTTGGAGTCAATATCTGGTCAGGATTTTGAGAAGACTGAAAAGCAAAATTCAGGAAATGGTTTTATGAAAAATGCTTTAGAGCATAAACTGGAAAATTCTCGTAAGGATAATTATACGGACCCTATGAATAATAACACGCGTAATACTTTCATGATTTCTAATAAATTTGAATGTGATGCAGTGAAACATAAGGTAGATCATAAGTATGAGAACCATCAGAAAGTAAAGGCTGTGTCTGAGCGGAAGACTAAGTCAAAGGGTGATCAGAGTCCTAGAAAAGCTGAGGCTGTTGCTAGAAAAGATAGCTTTTGTGGTACTAGTGATGCAATGGTAATCAATAAAGTGAGTGCTGGCTGTGACAATACATCTAAAAGTAAAATGAATAAGTCAAAGTCACTGAAGGGCAAAAAGTTCAGTGATAGTAACAGGGATTCATTGAGAGGAAAAAAATCGGAACAGAAAGTTGACAGTGTTGCCGGTAATGGTGCTATAAAAAATGGTAACATCAGTAATGGAAAACAGAGTGCATTTGGGGCTAAGGTAAAGGTAAGACCGAGTTGCCATAAAGTGGCCAACCAGTTGCTAGCTGGGCCATGCATAAAAGATACTTCAGCTGCACTTCTTATTACTGAAAACAGCATTGCTCCAGAGATGATTTCATCAGCAGGAGTGCCTCAAGTTATTGCGGAAGATTGGGTATGTTGTGACAGTTGCCAGAAATGGCGGCTACTGCCTAATGGTGTGAAGCCAGAGCATCTTCCAGAGAAGTGGTTGTGTAGCATGCTAAATTGGCTGCCTGGAATGAATTCATGTGACTTCAGTGAGGATGAGACAACAAAAGCACTTTACGCCTCGTATCAAATGCCAATTTCCAATGGTCAAAATAACATGCAAAGCCATGGCACTGAAACTGCAATTGGAGTGAGCTCTACTGATGCTTTGCAGTATGGCCTGAATCACAACATGTCCAGTTCTGATATGTTGTCTGAACGAGGAAAGAAGAAACATGTTATTAAGGAAAAGACAATGTCAGGAATTAATAATGACGTGCTTCAGTTTCCAAATTCTGCCAAGACCAATGTTCAAGTATCTGGAAAAAATAGAAGCTTGAATGTCATGAATCAGCATCCTGCCGACTTAAACCCAATGAAGAAGATGAGTTCTTCTAAACATCTTAGCAGTCTTGACAATATGATAGAAGAGAAAAGCGTGCCTATAGAGAAAGAAAAGCAAGTAAATGAAGGTGAGAGAAAGCATGTTAAGTTGAAACGTAAGATGGATGCTGATCAATATAAATTGGGAACTCCTAAGAAACCAAAAATTGAAAATGTTTTCTATGCTGATAAGCAATTGAATCCTGGCATGGACCTTGAGAAGGTGTCTCTATATTCAAGAAATAGTTTGGCAACAAAAGCTAGTGGGAAGGATATGAGGAAGCATGATGAATATTGTTTATCTGATGACGTACAGGACAGTTTACCAGTCACTGTCAAGAAAGAGGGAGATCAAGCTCAGGTCTTGTCTGGTGGTGGGTCCTTGGATGTGATAAACGGCAGTAAAAGTGGTTTAATGAAGAAAAGGAAATTGAAGGAGTGTATGGATGAtgaaaagcataacaactcttgctcctcacatggtgaaaagcataacaactcatactcctcgcatggtgaaaagcaGTATGGTGAAGAGGGCAATGCAAGTGAATTTAGGAAGGAAAAGAGATACAGAATTTTGAATAAAGAGGCAAAATCATTAACTGAAGGTGATAATAAATTGAGTAAAGGTGGGATGAGACAAGTTTGCTTGTCAGGCAATAGGGACCAAATGGCTGTTGGGACAGAAGTAAGATTTGTTGATAAAGGCAACCAACCAAGGAAGCATAGGAAAAATACTGCATCTCTTCATGCTTCAGATGGTATTGGTCAATTGGGCAAGGATTTGGGCTCTAGACCGCTTTCATTGGCAGCAACTTCGAGCTCTTCTAAAGTTTCAGGGTCTCATAAAGCTAAAACCTACTTTGAAGATCTGAGAGGTTCACCTGTTGAATCTGTCACCTCATCACCTCTGAGGGCCTTCAACTCGGATAAGAATATTTGGGCAGTAGGAGGCACTTCAGCGAAAGATGATGCTACAAAAGGTTGCCTCTCTTCAGTAGGTTCCAGGAGAAGCGTTGATAATAGGGAGGGAAAGCTATCAGTAAAATTGAAGGCGGGTAGAATTTCACGTGACTTACATCCTGCATCCCACAAATTATCTTCAATAGAGGTCCGGGTTGAGGATGCTAAAGACACAGCCAGGGTCCAAGCTAAAAAATCTTCTGAACTAAAGAATAGTCATTTGCTTGAAGGTGGTGTTCATGTTGAACAACCTGGTTATTGTGCTAATGGTAAACGTTATGAGGAGAAAGTAAACAAGGACAATCAGGAAAGTGAATTTTCTTGGCAGAAATCTGGTAAGGTTTCATCATTGCACAGCAAGGAGAAGGACAGAAAGTCTGGTTCTCATGTTGGTACAGATAAGATGAAGATTTCAGTTTCAGAGACTGGTGGTTATTCAAAAAAAAGTGGGAAGTATGATTCAGCAGTTGATCCCAGTAATCATGAATCTGGTGCTGAGTCAAAAAATAATGCTAAATATATTTCTCCAAAGTCTAAAAGTGAAATTGACTGTATTAGTCAGAAAAGTGCTTTAAGACATGGGCCAAATGAAACTGGAAAGCAAACTGAGATAAAACAAAGAGACTTTGAGAATTCAATTCTGAAGATGGATGCTCAATGTAGCACTGATAATAATAAGCCTATCCCCTGGCAAAACCTGACTCAGGATTTTGAGGGAGAAAACAAAGCTAATCTCACAGAATCAAGAGTTGGGAAATCCAAAGTTCTCTCGTCTGCAGTGGATGAAGTAAAAAGGGAAGCATTGAGTGTGGGTTCTAGAACTGTACCTCAGCATCAAAAGGGAGGCATGTCTAATGAGCATCATGTCCATGTTTCTGGCAATGATGATATGGCCAAGTCAATGAGAAATTATGCTGATGTTAGTAACAATGCTGGAGTTAATTATAGTTCTGGAAATTTTGCACCTGATCAGCAACTTACGTTGTTAAGTCCTTTGAGAACAAATTCTAACCAAACTGCTACTGACACCCTGAAAGAAGCTGCAAAACTAAAAGATAGAGCAGATAATTATAAGAACTCCGGGTTTGACTTTGAAAGCAATGAGACATACTTTCAAGCTGGTTTGAAGTTTCTGCATGGAGCATCTCTTTTAGAAAATTGTCATAATGAGAGTAGCAAGCATGGGGAAATGAGTCAAATGCAAATTTTTGCTACTGCAGCCAAACTTTTCAAATGCTGTGCCCATGAATATGAAACTCACCAAGAAATGGCAGCTGCTGCTTTGTCATATAAATGCATGGAGGTGGCATACATGAGAGTGGTTTACTGTAAAAATTCTAGTACTAACAGAGATCGACAGGAGTTGCAATCAACTCTTCAACTGGTTTCTCAAGGTGAATCTCCTTCATCTTCTGCATCCGATGTTGATAACCTTAACAATCAGGCAGCAGCAGATAAGGCTGCTTTGCCCAGGGGTACTAATACTCATGTTGCTATCAATCAAGTCATATCTGCTCGAACTCGTCCAAATTTAGTCAGGCTTCTTGATTTTACTCAGGACATACATTTTGTAATGGAAGCTTCTAGAAAATGTCAGAGCACTTTTGCTGCTGCTAATGTGATCATGCAAGAAGCACGGAATAAGGACTGTATAGCTTCTATTAGAAGCGTTATTGATTTCAGCTTCCAGGATGTAGATGAGCTTGTACGTCTGATTTGGACCGCAACAAAAGCCATAAGTCGCGCTGGTCTTGGTGGTACTAGAGATTAA 5313 0.3936 MADLRNNVKKDSKSLKYWKQKPLINLTCEAVCVNIILKCFFHIRVISWHDHCANNRFSLLGFRGFRVCFVGPRARKFWWMVEMKENTELEEGEACYYNGDDEANIDPDSFSYIDEKIQHFLGHFQKDFEGGVSAENLGAKFGGYGSFLPTQERSPCLWSHPRTPQRNHSSSKSNINLHMEVVSHNTKASSNVPHARPENASHSSYSLRDLREASVNDSVKKERGISSSDTAERCTLKDDTTKKTGNSTDQRPLKFRIKMKSNILAQKNAEIYSGLGLDNSPSSSMGNSPVESEGMPPVSQENAEGSPTGIIQVMTSFPILGCVLVSPLHESLLYMMKNEKVISDSKYLSSLKGHQDTCSMSTDESDSFVGNEHLKKRTVRIVRQSEKQLELKHTNGTFSEKDLTLHTKKRLGNRTPDCKDFLSNDLKCTPLSSSICDAGETAEVTAKAFEASKEFNENGVQGRMVPVEALKEESLESISGQDFEKTEKQNSGNGFMKNALEHKLENSRKDNYTDPMNNNTRNTFMISNKFECDAVKHKVDHKYENHQKVKAVSERKTKSKGDQSPRKAEAVARKDSFCGTSDAMVINKVSAGCDNTSKSKMNKSKSLKGKKFSDSNRDSLRGKKSEQKVDSVAGNGAIKNGNISNGKQSAFGAKVKVRPSCHKVANQLLAGPCIKDTSAALLITENSIAPEMISSAGVPQVIAEDWVCCDSCQKWRLLPNGVKPEHLPEKWLCSMLNWLPGMNSCDFSEDETTKALYASYQMPISNGQNNMQSHGTETAIGVSSTDALQYGLNHNMSSSDMLSERGKKKHVIKEKTMSGINNDVLQFPNSAKTNVQVSGKNRSLNVMNQHPADLNPMKKMSSSKHLSSLDNMIEEKSVPIEKEKQVNEGERKHVKLKRKMDADQYKLGTPKKPKIENVFYADKQLNPGMDLEKVSLYSRNSLATKASGKDMRKHDEYCLSDDVQDSLPVTVKKEGDQAQVLSGGGSLDVINGSKSGLMKKRKLKECMDDEKHNNSCSSHGEKHNNSYSSHGEKQYGEEGNASEFRKEKRYRILNKEAKSLTEGDNKLSKGGMRQVCLSGNRDQMAVGTEVRFVDKGNQPRKHRKNTASLHASDGIGQLGKDLGSRPLSLAATSSSSKVSGSHKAKTYFEDLRGSPVESVTSSPLRAFNSDKNIWAVGGTSAKDDATKGCLSSVGSRRSVDNREGKLSVKLKAGRISRDLHPASHKLSSIEVRVEDAKDTARVQAKKSSELKNSHLLEGGVHVEQPGYCANGKRYEEKVNKDNQESEFSWQKSGKVSSLHSKEKDRKSGSHVGTDKMKISVSETGGYSKKSGKYDSAVDPSNHESGAESKNNAKYISPKSKSEIDCISQKSALRHGPNETGKQTEIKQRDFENSILKMDAQCSTDNNKPIPWQNLTQDFEGENKANLTESRVGKSKVLSSAVDEVKREALSVGSRTVPQHQKGGMSNEHHVHVSGNDDMAKSMRNYADVSNNAGVNYSSGNFAPDQQLTLLSPLRTNSNQTATDTLKEAAKLKDRADNYKNSGFDFESNETYFQAGLKFLHGASLLENCHNESSKHGEMSQMQIFATAAKLFKCCAHEYETHQEMAAAALSYKCMEVAYMRVVYCKNSSTNRDRQELQSTLQLVSQGESPSSSASDVDNLNNQAAADKAALPRGTNTHVAINQVISARTRPNLVRLLDFTQDIHFVMEASRKCQSTFAAANVIMQEARNKDCIASIRSVIDFSFQDVDELVRLIWTATKAISRAGLGGTRD 1770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01438 1770 Coils Coil 1521 1541 - -
Gma15g01438 1770 MobiDBLite consensus disorder prediction 607 628 - -
Gma15g01438 1770 MobiDBLite consensus disorder prediction 185 211 - -
Gma15g01438 1770 MobiDBLite consensus disorder prediction 1282 1361 - -
Gma15g01438 1770 MobiDBLite consensus disorder prediction 1296 1312 - -
Gma15g01438 1770 MobiDBLite consensus disorder prediction 1010 1041 - -
Gma15g01438 1770 MobiDBLite consensus disorder prediction 1448 1469 - -
Gma15g01438 1770 Gene3D - 701 755 - -
Gma15g01438 1770 MobiDBLite consensus disorder prediction 213 245 - -
Gma15g01438 1770 MobiDBLite consensus disorder prediction 543 573 - -
Gma15g01438 1770 MobiDBLite consensus disorder prediction 185 249 - -
Gma15g01438 1770 PANTHER CW-TYPE ZINC-FINGER PROTEIN 83 1765 - -
Gma15g01438 1770 MobiDBLite consensus disorder prediction 1019 1035 - -
Gma15g01438 1770 MobiDBLite consensus disorder prediction 593 643 - -
Gma15g01438 1770 MobiDBLite consensus disorder prediction 1095 1120 - -
Gma15g01438 1770 MobiDBLite consensus disorder prediction 276 304 - -
Gma15g01438 1770 ProSiteProfiles Zinc finger CW-type profile. 700 753 IPR011124 GO:0008270
Gma15g01438 1770 MobiDBLite consensus disorder prediction 1341 1361 - -
Gma15g01438 1770 Pfam CW-type Zinc Finger 706 751 IPR011124 GO:0008270
Gma15g01438 1770 PANTHER CW-TYPE ZINC FINGER 83 1765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01438 Gma-Chr15 13000497 13012676 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01438 - - gmx:102667636 3336.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00225 17 1851129 1861186 Gma15g01438 15 13000497 13012676 PCT
Gma15g01438 15 13000497 13012676 Gma17g00225 17 1851129 1861186 PCT