Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01664 ATGGAGTGGGCCCTCATTCACACCCATCCAGGTGGGCTAGGGCTATGGCTTCGGAAAAGGAACGAGAAGACACAGAAACATAGACCTAACAATCAAACCAAAATCTCCGTTTCCGGGCTTCCTCTTCCATCACCGTTAGTTTCCACTGTGTTAGGCAGGATGGTTGATACCCTTGAAGAAAAGGTGACTCCTGATATGAAAAAGGATCCAATTGTTGTTGTTGTTGGTACTGATGCTCAGCCCGGCAATGATCTGGCGGAGTCTGAAATACCGCCAGAGTCTGAGCCGAGCAATTTGGAAACACGGCCTAACAAGGAACTTCCTGCTTCTGAAACACTGGCTACTAATGGTGAAGCAGTGGCGGCATTACCCAACCAATATTTGGGCAACTCTGAAGAACCTATGAATGACCATCTGGAGAATTGTGAATCACTAACCAGCAACCAGCCAGACAATGCTGAGGCCTCATGGAGCAGTCAGACAGGTGATTCCAAGGCAGTTCCCACCAATCAGTCTGCTAACTCTGAAGATTTGTCTAACAGTGGTCAGTTGGTTAGTTCTGAAGCACCTCTTGATATGAAGATGAAGGCTTCTCAACCCAGCAACCAGCAGCACAGTGATGAGGTGGTTACATCTGAAACCGTGCAAGGCAATGAAGGGATCATTTCTGAGACTCAGCAAAGCTCTGAGGTGGTCATGTCTGAGACACAGCCTGACAATGAAGCCAACATGCTCAAAACTCAGACATGCAATGATCAGGTCATCTCAGAAGCTCCGCCTGAAAATGAGTTGGCTAATCATACAAGGAATCATAACAATCTGCTCTCCCATTCTGAAACTGGTCCTGATAATCAATTCACTAATCTCTATATGATTCCTGAAGATCAGCTGCCTCAACctgaatcactgcctcattcagaaccactaccttattctgaaccactgACAGATACTCATCTATCAGACATCAAAGTAATGTATCATAATCATCTGAGTCATTATGAAACACTGCCCAACGATCATCCAAACCATTCAGAGGCTGTATCCCTCAATCAGCTATCGAACTCTGAAGCATTGTCCCATAATCAGCTGGCCAATTCCCAAATGCTGTCTCATTATGAGCTGGAAAATACTGAAACAATGCACCACAATCAGATAGTCAATTCTCAAGCAAACTATGAAATGACCTTTTCTGATGCCATACCCAGCTACGAGATAATAAATGCTGAGACACCCCTGAACAATGAGGATTGTATCCCAGAAGCGCAACCTATCAAGCGAAGGAAAAAGAAGTCTATAGTCTGGGAACACTTCACAATTGAAGCAGTTAGTCCTGAATGTAGAAGGGCACGCTGCAAGCAATGCGCTCAAACTTTTGCCTATAGTACAGGTTCAAAAGTTGCTGGCACCAGCCATCTCAAACGCCATGTAGCCAAGGGGACCTGCTCAGCTCTTTTGCGCAACCATAACCGTAATCAGTTGACCCCATATGCTGCACGAACTAGGAGAAGTGGGACTGGAGATGCTAGCAGTACACGGAAAAGACAATATAGATCCCCTAgacattttgttgatcatgattggaagttgcaGAGGCGAATTCTCAATGTTGTAATGGAACCATTTCCTGATTCAGATTCTGCACTCACCCATGCTATAGCTGTTTGCCTTTCTGATTGGGGGTTGGAGGGTAGGCTGTTTTCTATCACTTGCAATCAAGCACTGAGTAATGTTGCCCTTGAACATCTCAGACCATTACTCTCTGTGAAGAATCCACTTATCCTCAATGGTCAGTTGCTAGTTGGTAATTGCATTGCCTGTACTTTAAGCAGTGTTGCAAAGGATTTATTGGGTTCAGCACAAGACTTGATCAATAAAATTCGTGATAGTGTAAAATACGTGAAGATTTCAGAATTACATGAGGAAAAATTCTTGGAGCTGAAGCGGCATCTTCAGGTTCCTAGTGAAAGGAGCCTTTTTATTGATGACCAAATTCATTGGAATAGGTCATATCAAATGCTTGTGGCAGCTTCTGAGCTAAAGGAAGTTTTTTCTTGTTTGGACACTTCTGATCCTGATTACAAGGGAGCCCCCCCATCTATGCAGGATTGGAAGCTGGTTGAGATCCTCTGTAGCTACTTGAAGCCACTTTTTGATGCAGCAAACATTCTTACTACAACAACTCATCCCACTACTATTGCCTTCTTTCACGAAGTTTGGAAGTTGCAGTTAGATGCAGCTCGTGCAGTTACGAGTGAAGATCCCTTCATTAGCAACCTTAATAAAATtatgagtgaaaagattgataaGACTGTGGATGATGGAATTCAGGAGCTGTTTCATGAGTATGTAGCCCATCCCCTACCACTAAGACCGGTGTATTCTGAAAATGGAAGTGCTGAAAGCCACAGTAAGATGGAGGAATCCCCAGGAGGTGCTGTGTTGTCTGATAATGGTCTTACAGATTTTGATGCCTATATCATGGAAACCACTAGCCAACAGACgaaatctgagctagatcaGATCACCCTCCTACGCGCCACCTCATCGTCTCGTTCCCTCCCCAACACCAATTGCCGTGCGACATCAGCCACCGTGTCGTTTAGCCTCCCCACCCCGAAACCCCTTTCAGATACGCCTGAGAAAACCCCAAAGTGGTCGGCGAGGGCTATAAAGTCATATGCAATGGGGGAATTGGAAGCGAGGAAGCTCAAGTATCCAAACACGGGAACCGAGGCACTTCTCATGGGGATTTTGGTTGAAGGAACAAGTAAAGCTGCAAAATTCTTAAGAGCTAATGGAATTACTCTTTTCAAAGTACGTGAAGAAACAGTAGAGCTACTAGGGAAATCTGATTTGTATTTCTTCAGCCCTGAGCATCCTCCATTGACTGAACCAGCCCAGAAAGCCCTTGATTGGGCAATCGAGGAGAAATTGAAGTCAGGTGAAGGAGGAGAAATAAACGTGACACATTTACTTCTAGGAATTTGGTCACAGAAAGAATCAGCAGGTCAACAGATCTTGGATACTCTAGGTTTCAATGATGAAAAAGCCAAAGAACTTGCTAAAACAATTGATGGGGATGTTGATTTGAGTTTCAAAAGGCAAGCTTAA 3114 0.4287 MEWALIHTHPGGLGLWLRKRNEKTQKHRPNNQTKISVSGLPLPSPLVSTVLGRMVDTLEEKVTPDMKKDPIVVVVGTDAQPGNDLAESEIPPESEPSNLETRPNKELPASETLATNGEAVAALPNQYLGNSEEPMNDHLENCESLTSNQPDNAEASWSSQTGDSKAVPTNQSANSEDLSNSGQLVSSEAPLDMKMKASQPSNQQHSDEVVTSETVQGNEGIISETQQSSEVVMSETQPDNEANMLKTQTCNDQVISEAPPENELANHTRNHNNLLSHSETGPDNQFTNLYMIPEDQLPQPESLPHSEPLPYSEPLTDTHLSDIKVMYHNHLSHYETLPNDHPNHSEAVSLNQLSNSEALSHNQLANSQMLSHYELENTETMHHNQIVNSQANYEMTFSDAIPSYEIINAETPLNNEDCIPEAQPIKRRKKKSIVWEHFTIEAVSPECRRARCKQCAQTFAYSTGSKVAGTSHLKRHVAKGTCSALLRNHNRNQLTPYAARTRRSGTGDASSTRKRQYRSPRHFVDHDWKLQRRILNVVMEPFPDSDSALTHAIAVCLSDWGLEGRLFSITCNQALSNVALEHLRPLLSVKNPLILNGQLLVGNCIACTLSSVAKDLLGSAQDLINKIRDSVKYVKISELHEEKFLELKRHLQVPSERSLFIDDQIHWNRSYQMLVAASELKEVFSCLDTSDPDYKGAPPSMQDWKLVEILCSYLKPLFDAANILTTTTHPTTIAFFHEVWKLQLDAARAVTSEDPFISNLNKIMSEKIDKTVDDGIQELFHEYVAHPLPLRPVYSENGSAESHSKMEESPGGAVLSDNGLTDFDAYIMETTSQQTKSELDQITLLRATSSSRSLPNTNCRATSATVSFSLPTPKPLSDTPEKTPKWSARAIKSYAMGELEARKLKYPNTGTEALLMGILVEGTSKAAKFLRANGITLFKVREETVELLGKSDLYFFSPEHPPLTEPAQKALDWAIEEKLKSGEGGEINVTHLLLGIWSQKESAGQQILDTLGFNDEKAKELAKTIDGDVDLSFKRQA 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01664 1037 MobiDBLite consensus disorder prediction 79 104 - -
Gma16g01664 1037 ProSiteProfiles Clp repeat (R) domain profile. 880 1028 IPR004176 -
Gma16g01664 1037 SMART bed5 429 485 - -
Gma16g01664 1037 MobiDBLite consensus disorder prediction 128 184 - -
Gma16g01664 1037 SUPERFAMILY Double Clp-N motif 885 1027 IPR036628 -
Gma16g01664 1037 Pfam Domain of unknown function (DUF4413) 726 772 IPR025525 GO:0003677
Gma16g01664 1037 SUPERFAMILY Ribonuclease H-like 521 778 IPR012337 -
Gma16g01664 1037 SUPERFAMILY beta-beta-alpha zinc fingers 432 480 IPR036236 -
Gma16g01664 1037 MobiDBLite consensus disorder prediction 140 184 - -
Gma16g01664 1037 MobiDBLite consensus disorder prediction 495 513 - -
Gma16g01664 1037 PANTHER BED FINGER-RELATED 522 769 IPR045259 -
Gma16g01664 1037 PANTHER BED FINGER-RELATED 391 519 IPR045259 -
Gma16g01664 1037 PANTHER BED FINGER-RELATED 770 842 IPR045259 -
Gma16g01664 1037 Gene3D - 885 1032 IPR036628 -
Gma16g01664 1037 ProSiteProfiles Zinc finger BED-type profile. 429 489 IPR003656 GO:0003677
Gma16g01664 1037 PANTHER - 522 769 - -
Gma16g01664 1037 PANTHER - 391 519 - -
Gma16g01664 1037 PANTHER - 770 842 - -
Gma16g01664 1037 Pfam Clp amino terminal domain, pathogenicity island component 900 949 IPR004176 -
Gma16g01664 1037 Pfam Clp amino terminal domain, pathogenicity island component 986 1022 IPR004176 -
Gma16g01664 1037 MobiDBLite consensus disorder prediction 495 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01664 Gma-Chr16 37673779 37684711 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01664 - - gmx:106796566 891.338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01664 16 37673779 37684711 Gma16g01664 16 37673779 37684711 ECH
Gma16g01664 16 37673779 37684711 Gma09g01467 09 39326048 39329796 GST