Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01467 ATGGCTTCCATTCCCACACTCTCCCTTTCAAACCCCAACAACCATTGCACTCTCCCTCCCACCTCTCTCTTCGGCACCAGGATTACTCTCCTACGCGCCACCTCATCGTCCCGTTCCCTCCCCAACACCAATTGCCGTGCCACGTCAGCAACCGTGTCGTTTAGCCTCCCCACCCCGAAACCCCTTTCGGATACTCCTGAGAAAACACCAAAGTGGTCGGCGAGGGCTATAAAATCGTATGCAATGGGGGAATTGGAAGCGAGGAAGCTCAAGTATCCAAACACGGGAACCGAGGCACTTCTCATGGGGATTTTGGTTGAAGGAACAAGTAAAGCTGCAAAATTCTCAAGAGCTAATGGAATTACTCTTTTCAAAGTACGTGAAGAAACAGTAGAGCTACTTGGGAAATCTGACTTGTATTTCTTCAGCCCTGAGCATCCTCCATTGACTGAACCAGCCCAGAAAGCCCTTGATTGGGCAATTGAAGAGAAATTGAAGTCAGGTGAAGGAGGAGAAATAAACGTTACACATTTACTTCTAGGAATATGGTCACAAAAAGAATCAGCAGGTCAACAGATCTTGGCTACTCTAGGTTTCAATGATGAAAAAGCCAAAGAACTTTCTAAATCAATTGATGGAGATGTTGATTTGAGTTTCAAAAGGCAGGCTTAA 672 0.4613 MASIPTLSLSNPNNHCTLPPTSLFGTRITLLRATSSSRSLPNTNCRATSATVSFSLPTPKPLSDTPEKTPKWSARAIKSYAMGELEARKLKYPNTGTEALLMGILVEGTSKAAKFSRANGITLFKVREETVELLGKSDLYFFSPEHPPLTEPAQKALDWAIEEKLKSGEGGEINVTHLLLGIWSQKESAGQQILATLGFNDEKAKELSKSIDGDVDLSFKRQA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01467 223 ProSiteProfiles Clp repeat (R) domain profile. 66 214 IPR004176 -
Gma09g01467 223 Pfam Clp amino terminal domain, pathogenicity island component 86 135 IPR004176 -
Gma09g01467 223 Pfam Clp amino terminal domain, pathogenicity island component 172 208 IPR004176 -
Gma09g01467 223 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 11 220 - -
Gma09g01467 223 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 11 220 IPR044217 -
Gma09g01467 223 Gene3D - 71 217 IPR036628 -
Gma09g01467 223 SUPERFAMILY Double Clp-N motif 71 211 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01467 Gma-Chr9 39326048 39329796 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01467 - - gmx:100802336 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01664 16 37673779 37684711 Gma09g01467 09 39326048 39329796 GST