Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01617 ATGGGGGCCGGTGTTTCTACAACTGCAATAGAAAATGATGATGGGGGCACTTTTTCTTTGTCAACAAAGACTACCCTTGATGATATCCCTGAGAATTGCATCTCTTCAATGATGATGAGTTTTGATCCACAAGAGATTTGCACATTGGCAAGAGTGAATAAGGCCTTTCACAGAGCTTCCTCTGCTGACTTTGTGTGGGAATCAAAGTTGCCCCCAAGCTATAAATTCCTTCTAAATAAAGTACTTGGTGAACAAAATCTTGGTTCCATGACCAAGAAAGAGATCTATGCCAAACTGTGTAGACCAAATTTCTTTGATGGTGCCAACAAAGAAGTTTGGCTGGACAGAAGCAGAGGACAAGTTTGTATGTTCATTTCATCAAAATCCTTCAAGATTACAGGAATAGATGATAGAAGATATTGGAATAATATTCCAACTGAGGAATCCAGGTTCAAGAGTGTTGCATATCTTCAACAAATGTGGTGGGTTGAAGTAATAGGGGAGCTAGAGTTTGAGTTTCCAAAAGGGAACTATAGTGTATTTTTCAAGCTTCAATTGGGCAAGCCCTCAAAGAGATTGGGCCGGCGAGTGTGCAACCTTGATCAAGTGCATGGATGGGACATCAAGCCCGTTAGATTTCAACTATCTACATCGGACGGCCAGCGTTCACTCTCCCAGTGCTATTTGCGTGGGTCCGGAGAGTGGGCCCACTACCATGTTGGTGACTTTGCAATCGATAAGCCCAATGGGCCAACCAACATCAACTTCTCCTTGGCCCAAATTGATTGCACTCACACCAAAGGTGGTCTTTGCATAGATGGGGTAGTGATTTGCCCGAAGGAGTTCACAGAAAGATTGAAACAATTTTAG 870 0.4299 MGAGVSTTAIENDDGGTFSLSTKTTLDDIPENCISSMMMSFDPQEICTLARVNKAFHRASSADFVWESKLPPSYKFLLNKVLGEQNLGSMTKKEIYAKLCRPNFFDGANKEVWLDRSRGQVCMFISSKSFKITGIDDRRYWNNIPTEESRFKSVAYLQQMWWVEVIGELEFEFPKGNYSVFFKLQLGKPSKRLGRRVCNLDQVHGWDIKPVRFQLSTSDGQRSLSQCYLRGSGEWAHYHVGDFAIDKPNGPTNINFSLAQIDCTHTKGGLCIDGVVICPKEFTERLKQF 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01617 289 ProSiteProfiles F-box domain profile. 23 69 IPR001810 GO:0005515
Gma16g01617 289 PANTHER F-BOX PROTEIN PP2-A15 1 289 - -
Gma16g01617 289 SUPERFAMILY F-box domain 21 84 IPR036047 GO:0005515
Gma16g01617 289 Pfam Phloem protein 2 121 279 IPR025886 -
Gma16g01617 289 PANTHER F-BOX PROTEIN 1 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01617 Gma-Chr16 37050813 37054698 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01617 - - gmx:100816360 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01617 16 37050813 37054698 Gma09g01399 09 37818172 37822161 GST
Gma16g01617 16 37050813 37054698 Gma10g02260 10 50157107 50161284 PCT
Gma16g01617 16 37050813 37054698 Gma20g01456 20 41694848 41698587 PCT
Gma10g02260 10 50157107 50161284 Gma16g01617 16 37050813 37054698 PCT
Gma20g01456 20 41694848 41698587 Gma16g01617 16 37050813 37054698 PCT