Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02260 ATGGGGGCTGGTGTTTCTTCATGTAATAAAGTTGAAAAAGAAGGAGGAGGGTCTATTTCTTCATCATCAAGAGATTCAAGACCCGGTCTTGGTGACATCCCAGAGAGTTGCATCTCCTCCTTGTTCATGAATCTTGATCCACCCGATATTTGCAAATTAGCAAGAGTGAATAGGGCCTTTCATCGAGCTTCCTCAGCTGATTTTGTATGGGAATCGAAGTTGCCACCGAGCTACAAGTTTCTTGCTAATAAAGTTCTTGGTGAAGAAAATATTGCTACTATGACTAAGAAAGAGATTTATGCAAAACTTTGCCTACCCAATCGTTTTGACGGTGGCACCAAAGAAGTTTGGTTGGACAAATGTAGTGGGCAAGTTTGTTTGTTCATGTCATCCAAGTCCTTGAAGATTACAGGAATAGATGATAGAAGATACTGGAATTATATTCCAACTGAAGAATCCAGGTTAGGGATGAATAGGTTCCAGAGTGTTGCATATCTTCAACAAATGTGGTGGGTTGAAGTGGTGGGGGAGCTAGAGTTTGAATTCCCTGTGGGGAGTTACAGCTTAATTTTCAGACTCCAATTGGGCAAGGCCTCAAAGAGATTGGGCCGGCGCGTGTGCAACGTTGATCAAGTGCATGGCTGGGATATCAAGCCCATCCGATTCCAACTCTCCACATCCGACGGCCAGCTTTCACTCTCAGAGTGTTACTTGTGTGGGCCTGGGGAGTGGGTCTACTACCACGTTGGAGATTTCGTGGTCGAAAAGCCCAATGAGCCAATAAATATCAAGTTTTCGTTGGCCCAAATAGATTGCACTCACACTAAAGGTGGCCTCTGCGTAGATAGTGCCATCATTTGCCCAACGGAGTTCAAAGAAAGACTCAAACAAAGTTAG 897 0.4426 MGAGVSSCNKVEKEGGGSISSSSRDSRPGLGDIPESCISSLFMNLDPPDICKLARVNRAFHRASSADFVWESKLPPSYKFLANKVLGEENIATMTKKEIYAKLCLPNRFDGGTKEVWLDKCSGQVCLFMSSKSLKITGIDDRRYWNYIPTEESRLGMNRFQSVAYLQQMWWVEVVGELEFEFPVGSYSLIFRLQLGKASKRLGRRVCNVDQVHGWDIKPIRFQLSTSDGQLSLSECYLCGPGEWVYYHVGDFVVEKPNEPINIKFSLAQIDCTHTKGGLCVDSAIICPTEFKERLKQS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02260 298 Pfam Phloem protein 2 125 288 IPR025886 -
Gma10g02260 298 MobiDBLite consensus disorder prediction 1 30 - -
Gma10g02260 298 MobiDBLite consensus disorder prediction 13 27 - -
Gma10g02260 298 SUPERFAMILY F-box domain 23 86 IPR036047 GO:0005515
Gma10g02260 298 PANTHER F-BOX PROTEIN PP2-A15 1 297 - -
Gma10g02260 298 PANTHER F-BOX PROTEIN 1 297 - -
Gma10g02260 298 ProSiteProfiles F-box domain profile. 27 73 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02260 Gma-Chr10 50157107 50161284 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02260 - - gmx:100795463 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02260 10 50157107 50161284 Gma10g02260 10 50157107 50161284 ECH
Gma10g02260 10 50157107 50161284 Gma20g01456 20 41694848 41698587 GST
Gma16g01617 16 37050813 37054698 Gma10g02260 10 50157107 50161284 PCT
Gma09g01399 09 37818172 37822161 Gma10g02260 10 50157107 50161284 PCT
Gma10g02260 10 50157107 50161284 Gma16g01617 16 37050813 37054698 PCT
Gma10g02260 10 50157107 50161284 Gma09g01399 09 37818172 37822161 PCT