Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01551 ATGGAAACCCCATTAGTGATCCAAAAGCATACTTCAGAACCCGACTATTTGCCGGTGGAAAGCTTGAAGGATGTTATGTTTGTTTTGCGAACGGAGACAGTGAAGATATGGAGAGTAGCACTCCCAATGGCTCTGCTTGCACTGTTTCAGCTTCTCATGGACTCCTCAACTTCCATCTATGCTGGTCATATTGGAGACATTGAACTCTCTTCTATCGGTGTTTACCAAGGTGTCATCGGTGCCATCTATTTTTACTTGCTGTTTGGTATGTCATCTGCACTGGCAACACTTTGTGGCCAAGCTTTTGGAGCAGGAAAAATTCAATCTACTTGTATTTATGTTCAAAGATCATGGATTATACTTACTGCCACTTGTATAATCCTCTTGCCTATTTATGTATATGCCACTCCAATCTTAAAGTTGCTTGGCCAAGATGAAGGAATAGCTGAAGTTGCTGGAAGATATTCTATACAAGTAATTCCCTACATGTTTTCTTTTGCTGTAGCTTTTCCCATCCAGAGATTTCTTCAGGCCCAGAGCAAGGTTAAAGTAATTATGTGCATAGCATTTGTGGATTTGCTTATACAAAATGGGTTGCTTTACATATTCATAAATGTATTTGGTTGGGGTATAACCGGCTTGGCAATAGTGACTAATATCGTAGGGTGGTTATATGCTGTGGCTTTGGTTGTGTATACCATTGGTTGGTGCAAAGAAGAATGGAGTGGATTTTGTTGGATGGCATTTAGGGATTTGTGGGCCTTTGCTAAGTTAAGCCTTGCATCATCTGTAATGAATTGCTTAGAGCAATGGTATATTACATGCATTATGCTACTTGCTGGTCTACTAGACAATCCTGTGATTGCTGTTGGTTCCTATTCTATTTGCTTCAATGTTCAGGGTTGGGACGACATGCTACGCCTTGGAATAAATACAGCCATAAGTGTTCGTGTCTCCAATACGCTTGGCATGTCGCATCCAAGAGCAGCCATATACTCTTTCTGTGTGACAATGTTCCAGTCTCTCCTCCTTGGTATTCTTTTCATGACCGTAATTTTCTTTAGTAAAGATGAGTTTGCCAAAATCTTTACCGACAGTGAGGATATGATACTAGCTGCTGCTGATTTAGCATACCTTCTTGGTGTAACAATTGTTCTCAATAGTGCTTCACAGGTGATGTCAGGTGTGGCCATTGGAAGTGGATGGCAAGTTATGGTTGGTTATATAAACCTAGCATGTTATTACATTGTTGGACTCCCTATTGGAATTTTCCTTGGTTTCAAGCTGCATTTAGGGGTCAAGGGTCTCTGGGGAGGCACAATGTGCGGCAGTATTCTTCAGACTTTAGTCCTCTTTACAATTATTTGGAAGACCAACTGGTCCAAGGAGGTGGAACAAACAGCTCATCGCATGCGATTATATGTGGAGCAATAA 1434 0.4114 METPLVIQKHTSEPDYLPVESLKDVMFVLRTETVKIWRVALPMALLALFQLLMDSSTSIYAGHIGDIELSSIGVYQGVIGAIYFYLLFGMSSALATLCGQAFGAGKIQSTCIYVQRSWIILTATCIILLPIYVYATPILKLLGQDEGIAEVAGRYSIQVIPYMFSFAVAFPIQRFLQAQSKVKVIMCIAFVDLLIQNGLLYIFINVFGWGITGLAIVTNIVGWLYAVALVVYTIGWCKEEWSGFCWMAFRDLWAFAKLSLASSVMNCLEQWYITCIMLLAGLLDNPVIAVGSYSICFNVQGWDDMLRLGINTAISVRVSNTLGMSHPRAAIYSFCVTMFQSLLLGILFMTVIFFSKDEFAKIFTDSEDMILAAADLAYLLGVTIVLNSASQVMSGVAIGSGWQVMVGYINLACYYIVGLPIGIFLGFKLHLGVKGLWGGTMCGSILQTLVLFTIIWKTNWSKEVEQTAHRMRLYVEQ 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01551 477 CDD MATE_eukaryotic 32 466 IPR045069 GO:0042910|GO:1990961
Gma16g01551 477 Pfam MatE 42 199 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma16g01551 477 Pfam MatE 262 422 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma16g01551 477 PANTHER PROTEIN DETOXIFICATION 1 473 - -
Gma16g01551 477 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 473 - -
Gma16g01551 477 TIGRFAM matE: MATE efflux family protein 42 437 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01551 Gma-Chr16 35867811 35872432 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01551 K03327 - gmx:100789080 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01551 16 35867811 35872432 Gma09g01282 09 34841267 34848907 GST
Gma16g01551 16 35867811 35872432 Gma10g02204 10 49613271 49617313 PCT
Gma16g01551 16 35867811 35872432 Gma20g01515 20 42210302 42214453 PCT
Gma10g02204 10 49613271 49617313 Gma16g01551 16 35867811 35872432 PCT
Gma20g01515 20 42210302 42214453 Gma16g01551 16 35867811 35872432 PCT