Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02204 ATGGACGCTCCCCTGCTGCTGGCCAAAGGCGAGGGGGCGGCGCTGGTGACGGAGAACGGCGACTACGTGGCGGTGAGGGAGCTGAAGGAGGTGAAGAAGGTGTTCTGGATTGAGACGAAGAGAGTGTGGCAGATTGCGATGCCCATTGTTTTCAACATATGGTGTCAGTTCGGTGTGAATTCCGTGACCAGCATGTTCGTTGGACACCTCGGCGACATTCAGCTCTCTGCTATCTCCCTCATTAACTCCGTCATTGGCACTTTTGCCTTTGGTTTCATGCTTGGGATGGGAAGTGCAACTGAGACGCTTTGTGGACAAGCTTTCGGAGCTGGGCAGGTTAATATGCTTGGTGTTTATATGCAACGCTCATGGGTGATATTATCCGTGACCAGTATTTTGCTCTTGCCAATATACATTTTTGCTGGTCCAATTTTGAAGTTTCTTGGTCAACAGGAAGATATAGCTGATCTTGCAGGGAGTTTCTCTATTTTAGTAATTCCACAATTTCTTTCACTTCCCTTCAATTTTCCAACGCAAAAGTTCCTTCAAGCTCAGAGCAAGGTTAACATTATTGCATGGATTGGGTTGGTGGCTTTAATTCTGCACATTGGGATGCTCTGGCTCTTAATTTATGTGCTAGATTTTGGCTTAGCTGGTGCAGCTTTGGCGTTTGATATCACAAGCTGGGGGATCACAGTGGCTCAACTTGTTTATGTTGTGATCTGGTGTAAGGATGGATGGACTGGATTGTCATGGCTGGCTTTTAAGGATATTTGGGCCTTTGTTAGGCTCTCTCTTGCATCAGCTGTAATGCTTTGCCTTGAAGTTTGGTATATGATGAGCGTTATAGTTCTTGCTGGCAACCTTGATAATGCATTGGTTGCTGTTGATTCCCTCTCTATATGCATGAATATCAATGGGTGGGAAGCCATGCTCTTCATTGGAGTAAATGCAGCTGTCAGTGTCAGAGTTTCCAATGAACTTGGGCTTGGACATCCAAGAGCTGCCAAGTACTCTGTCTATGTGACAGTCTTTCAGTCGCTTTTCTTGGGAATCTTTTTCATGGCTATTATTTTGGCGACTAGAGATTATTATGCCATCATTTTTACAAACAGTGAGGTTTTGCATAAGGCTGTTGCGAAACTAGGATACCTCCTTGCTGTGACAATGGTTCTAAACAGTGTTCAACCAGTGGTTTCAGGTGTTGCTATTGGAGGTGGGTGGCAAGCCCTGGTGGCCTACATCAACATAGGTTGTTATTACTTATTTGGGCTTCCACTGGGGTTCCTTCTTGGCTATGAAGCAAATTTGGGGGTTGAGGGACTTTGGGGTGGTATGATATGCGGAATTGTTATCCAGACGTTGCTGCTCTTGTTGATACTTTACAAAACCAATTGGAAGAAAGAGGTGGAACAAACAACTGAACGCATGCGGATATGGGGAGGACAAGACATTGGAGTTGATAAGATAGTGGCTTCTACATAA 1485 0.4519 MDAPLLLAKGEGAALVTENGDYVAVRELKEVKKVFWIETKRVWQIAMPIVFNIWCQFGVNSVTSMFVGHLGDIQLSAISLINSVIGTFAFGFMLGMGSATETLCGQAFGAGQVNMLGVYMQRSWVILSVTSILLLPIYIFAGPILKFLGQQEDIADLAGSFSILVIPQFLSLPFNFPTQKFLQAQSKVNIIAWIGLVALILHIGMLWLLIYVLDFGLAGAALAFDITSWGITVAQLVYVVIWCKDGWTGLSWLAFKDIWAFVRLSLASAVMLCLEVWYMMSVIVLAGNLDNALVAVDSLSICMNINGWEAMLFIGVNAAVSVRVSNELGLGHPRAAKYSVYVTVFQSLFLGIFFMAIILATRDYYAIIFTNSEVLHKAVAKLGYLLAVTMVLNSVQPVVSGVAIGGGWQALVAYINIGCYYLFGLPLGFLLGYEANLGVEGLWGGMICGIVIQTLLLLLILYKTNWKKEVEQTTERMRIWGGQDIGVDKIVAST 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02204 494 PANTHER MULTIDRUG RESISTANCE PROTEIN 20 476 - -
Gma10g02204 494 CDD MATE_eukaryotic 38 472 IPR045069 GO:0042910|GO:1990961
Gma10g02204 494 Pfam MatE 48 207 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma10g02204 494 Pfam MatE 268 430 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma10g02204 494 PANTHER PROTEIN DETOXIFICATION 20 476 - -
Gma10g02204 494 TIGRFAM matE: MATE efflux family protein 48 443 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02204 Gma-Chr10 49613271 49617313 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02204 K03327 - gmx:100780766 956.822
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02204 10 49613271 49617313 Gma10g02204 10 49613271 49617313 ECH
Gma10g02204 10 49613271 49617313 Gma20g01515 20 42210302 42214453 GST
Gma16g01551 16 35867811 35872432 Gma10g02204 10 49613271 49617313 PCT
Gma09g01282 09 34841267 34848907 Gma10g02204 10 49613271 49617313 PCT
Gma10g02204 10 49613271 49617313 Gma16g01551 16 35867811 35872432 PCT
Gma10g02204 10 49613271 49617313 Gma09g01282 09 34841267 34848907 PCT