Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01515 ATGGCTCAGGTCGTGGCTTCACGATCCATTCAAAGCACCCCATTGTGCCCCACTTCTGGATCTGCACGTGACAGAACCCAAAACCTGTTAAAGCCTCCATCTTTTGCTTCCAAGGTGTTCCCATTGGGAGAGAACAATAACAAACGCTCCAAACTCAGGCTCAGAAGCCTTCAGATCAGTGCAAGGAAATCTGCCCCTTCTGAAGTCATCCCCATGTCACCCGAAGATGATCCAAAAATTGAGGAGCATTTGCAACATTTACGTGGGGTGCAGCCATTTGGTGAGAACTCTGTTGGAATGTGGTCTAAGCCAACGTTTAGGCGCAAGACGAAGATAGTGTGCACCATTGGACCTTCTACCAATACGAGGGAAATGATTTGGAAGCTGGCTGAGGCTGGCATGAATGTTGCTCGGTTGAATATGTCTCATGGGGACCATGCTTCTCATCAGAAAGTTATTGACTTGGTTAAGGAGTATAATGCTTCTCATGAAGACAATGTGATTGCAATCATGCTTGACACAAAGGGTCCTGAAGTTAGGAGTGGGGATTTGCCACAACCAATTACATTAATGCCTGGGCAGGAATTCACTTTTACTATTCAGAGAGGTGTTGGAACTGCTGATTGTGTTAGTGTGAACTACGATGATTTTGTGAATGATGTGGAAATGGGGGACATGCTTCTTGTCGATGgtggtatgatgtctatggttgttaagtctaagacagaggattctgtgaaatgtgaagttgttgatggaggagagctcaagtcaaggcgacatttgaacgttagaggaaaaagtgcaacactaccttcaatcactgagaaggattgggatgatatcaagtttggagtggataacaaagttgacttctatgctgtttcctttgttaaggatgctgaagttgttcatgaactgaagaattatttgaagagctgcggtgctgatatacatgtcatcgtaaaaattgaaagtgcagactctataccaaatttgcattcaattatcactgcatctgatggggcaatggttgccagaggagatcttggcgctgagctccctattgaagaggttccacttttgcaggaagagataatcaacttgtgtcgtagcatgggaaaggctgttattgtggcaacaaatatgctagaaagcatgattgttcacccaactccaaccagagcagaggtatcagatatagcaattgcagttcgtgaaggttctgatggaataatgttgtctggagaaacagctcatggaaagttcccactaaaagctgtgcaagtaatgcacacagtagcattgcggacagaagccactataccaggtggtaaaatgccacctaacattggtcaagtgttgaagaaccacatgagtgagatgtttgcataccatgcaaccatgatgtctaacacccttggaacctcaactgttgtcttcactagaacgggtttcatggctGTCCTTCTGAGTCACTATCGTCCTTCTGGGACCATATTTGCTTTTACAGATGAGAAGAGGGTACAACAGAGGCTGGCTTTGTATCAAGGAGTCTGTCCCATATACATGGAATTCTGTGATGATTCTGAGGCAACTTTTAGAAGAGCCTTGGATTTGCTGCAGAAGCAAGCAATGGTGAAGGAAGGAGAAGAAGTAGCACTTGTACAAAGTGGTAGGCAACCCATATGGAGGTTCCAATCCACGCACAATATCCAGGTTAGGAAAGTGTAA 1734 0.252 MAQVVASRSIQSTPLCPTSGSARDRTQNLLKPPSFASKVFPLGENNNKRSKLRLRSLQISARKSAPSEVIPMSPEDDPKIEEHLQHLRGVQPFGENSVGMWSKPTFRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNASHEDNVIAIMLDTKGPEVRSGDLPQPITLMPGQEFTFTIQRGVGTADCVSVNYDDFVNDVEMGDMLLVDGGMMSMVVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAEVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIINLCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVQVMHTVALRTEATIPGGKMPPNIGQVLKNHMSEMFAYHATMMSNTLGTSTVVFTRTGFMAVLLSHYRPSGTIFAFTDEKRVQQRLALYQGVCPIYMEFCDDSEATFRRALDLLQKQAMVKEGEEVALVQSGRQPIWRFQSTHNIQVRKV 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01515 577 Pfam Pyruvate kinase, barrel domain 108 443 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma16g01515 577 SUPERFAMILY PK beta-barrel domain-like 177 268 IPR011037 -
Gma16g01515 577 PANTHER PYRUVATE KINASE 32 577 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma16g01515 577 SUPERFAMILY PK C-terminal domain-like 426 577 IPR036918 -
Gma16g01515 577 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 100 442 IPR015813 GO:0003824
Gma16g01515 577 Pfam Pyruvate kinase, alpha/beta domain 465 557 IPR015795 -
Gma16g01515 577 PANTHER PYRUVATE KINASE 32 577 - -
Gma16g01515 577 PRINTS Pyruvate kinase family signature 166 182 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma16g01515 577 PRINTS Pyruvate kinase family signature 290 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma16g01515 577 PRINTS Pyruvate kinase family signature 320 346 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma16g01515 577 PRINTS Pyruvate kinase family signature 347 371 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma16g01515 577 PRINTS Pyruvate kinase family signature 372 396 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma16g01515 577 PRINTS Pyruvate kinase family signature 397 415 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma16g01515 577 PRINTS Pyruvate kinase family signature 416 432 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gma16g01515 577 ProSitePatterns Pyruvate kinase active site signature. 318 330 IPR018209 GO:0004743|GO:0006096
Gma16g01515 577 Gene3D - 450 577 IPR036918 -
Gma16g01515 577 Gene3D - 178 271 IPR015806 GO:0004743|GO:0006096
Gma16g01515 577 MobiDBLite consensus disorder prediction 1 27 - -
Gma16g01515 577 Gene3D - 110 435 IPR040442 -
Gma16g01515 577 TIGRFAM pyruv_kin: pyruvate kinase 108 576 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01515 Gma-Chr16 35015974 35022675 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01515 K00873 - gmx:100815822 1135.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01515 16 35015974 35022675 Gma09g01192 09 32584026 32592894 GST
Gma16g01515 16 35015974 35022675 Gma10g02171 10 49250308 49255305 PCT
Gma16g01515 16 35015974 35022675 Gma20g01542 20 42451218 42456020 PCT
Gma10g02171 10 49250308 49255305 Gma16g01515 16 35015974 35022675 PCT
Gma20g01542 20 42451218 42456020 Gma16g01515 16 35015974 35022675 PCT