Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01437 ATGTCTTGGAAGAGCCAGAGGGGTCTGATTCTGATCGAAACCCGCGCCATGGCCATGTTCGATTCCATCTTCAACAAAGGCTTTAAGGCTGCCAAATGTAAAACACTGCTGAAGTTGACAATTCCACGTATAAAGCTTCTAAGAAACAGAAGAGAGATTCAGTTGAAAAACATGCGGCGTGAGATTGCCAAGCTGCTTGAGACTGGCCAAGAAGCCACGGCTCGAATTAGGGTAGAACATATTATAAGAGAGGAGAACATGATGGCTGCTCAAGAAATCATTGAACTCTTTTGCGAACTTATTGCGGTCCGCCTTCCAATAATTGAATCTCAAAGGGAATGCCCCCTTGACTTGAAGGAAGCCATATCCAGTGTATGTTTTGCTGCACCAAGGTGTGCAGATTTGCCTGAGTTGTTGCAGGTTCAGATGCTATTTGCTGCCAAATATGGGAAGGAATTTTTATCTGCTGCAACTGAGCTCAGGCCAGACTGTGGTGTTAATCGCCAGTTAATAGAGCTGCTTTCAATTCGTGCTCCTTCACCAGAAAAGAAACTGAACCTTCTAAAAGAAATTGCTGTTGAGCATGATTTAGATTGGGATCCAGAAGCTTCAGAAACTGAGTTCTTTAAAAAGCATGAAGATTTATTGAATGGCCCCACCCAATTCGTTAGTGGATCTAAGTTGCCCCTTCCTGACGAAAAACACAATGAAGAGATATACTCCACTCATGATACACCCAATAAAGAACAAGCTGATTCTGATTCTGATTCTGATACATTAGAATTTCCTGAAGTTCCTAAGGTATCAGTCCAGCCAAATGCAAATGTTGCCACAGCTCCAGAAATGGTTACACATTTGACTATGGAACCCCTTGATGTTGATCTTGATTCACCAAGACATTCTGGAGATTTTTCAGATCTGAAGCAGGAGCAAGTTGAAGATAGATCAACAGTTCACAAAGATGAACCTCACACTTCAATCGGCAAAATGGAGAATAAACAGTATTTGCCGTTCATCTCCCCTCCTTCTGTATCATCTGGATCGTTTTTTGCAAGACATAGTGACTCACCTCCCTCCTTCTCAAGCACAAAGTCGGAAGGCAATGTGGACTTACAGGATGTGTTGGCTGCCGCCCATGCTGCTGCTGAAACTGCTGAACGTGCAGCAGCGGCAGCTCGCAACATGGCCAGCCTCGCTCAAGTCCGAATTAATGAGCTGACGAAGAAGAAAAGTACTGAACATGTGCCCGACAGCAGCAGCTCTGAGAACCCATTTTATGCTGGTGGTGGTAATGAATCTCCAACAATAGAAAAGCATTTCACTGATCAAATTCCTGCAGGTAACTCTGATGCCCTTAATAGAAACAATGTTGAACATCACCTGGATCATCATGCTTCCCCAGGCTCTCATTCATCAAGTTTTCCTTCCTTTGACACGCTCAAGGAAGATTTTGCTTCTTCCCTACCCAATGATCATCATGTATTGAATGACAAGTCCTCGAGTCACCAGCCAAAGAGATTACCTTCAATGGATGATGACACATATTTCTCGTACCCCAACTTATTTACCTCTCAAAACTCTAATGTGGGATCTCAGGCTCATTCAGATAATAGCCGTTCCCCTCATGATCTGTGA 1635 0.4361 MSWKSQRGLILIETRAMAMFDSIFNKGFKAAKCKTLLKLTIPRIKLLRNRREIQLKNMRREIAKLLETGQEATARIRVEHIIREENMMAAQEIIELFCELIAVRLPIIESQRECPLDLKEAISSVCFAAPRCADLPELLQVQMLFAAKYGKEFLSAATELRPDCGVNRQLIELLSIRAPSPEKKLNLLKEIAVEHDLDWDPEASETEFFKKHEDLLNGPTQFVSGSKLPLPDEKHNEEIYSTHDTPNKEQADSDSDSDTLEFPEVPKVSVQPNANVATAPEMVTHLTMEPLDVDLDSPRHSGDFSDLKQEQVEDRSTVHKDEPHTSIGKMENKQYLPFISPPSVSSGSFFARHSDSPPSFSSTKSEGNVDLQDVLAAAHAAAETAERAAAAARNMASLAQVRINELTKKKSTEHVPDSSSSENPFYAGGGNESPTIEKHFTDQIPAGNSDALNRNNVEHHLDHHASPGSHSSSFPSFDTLKEDFASSLPNDHHVLNDKSSSHQPKRLPSMDDDTYFSYPNLFTSQNSNVGSQAHSDNSRSPHDL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01437 544 MobiDBLite consensus disorder prediction 495 509 - -
Gma16g01437 544 MobiDBLite consensus disorder prediction 407 453 - -
Gma16g01437 544 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 17 533 - -
Gma16g01437 544 Coils Coil 48 75 - -
Gma16g01437 544 Gene3D - 21 208 IPR042277 -
Gma16g01437 544 MobiDBLite consensus disorder prediction 346 366 - -
Gma16g01437 544 MobiDBLite consensus disorder prediction 238 261 - -
Gma16g01437 544 MobiDBLite consensus disorder prediction 516 537 - -
Gma16g01437 544 PANTHER IST1 FAMILY MEMBER 17 533 IPR005061 GO:0015031
Gma16g01437 544 MobiDBLite consensus disorder prediction 295 325 - -
Gma16g01437 544 MobiDBLite consensus disorder prediction 238 255 - -
Gma16g01437 544 MobiDBLite consensus disorder prediction 488 544 - -
Gma16g01437 544 Pfam Regulator of Vps4 activity in the MVB pathway 34 197 IPR005061 GO:0015031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01437 Gma-Chr16 33458650 33465611 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01437 - - gmx:100800901 1001.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01437 16 33458650 33465611 Gma16g01437 16 33458650 33465611 ECH
Gma16g01437 16 33458650 33465611 Gma02g00689 02 6675777 6679946 GST