Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00689 ATGGCCATGTTCGATTCCATCTTCAACAAAGGTTTTAAGGCTGCCAAATGTAAAACATTGCTGAAGCTGACAATTCCGCGTATAAAGCTGCTAAGAAACAGACGAGAGATTCAGTTGAAGAACATGCGGCGTGAGATTGCCAAGCTACTTGAGACTGGACAAGAAGCCACAGCTCGAATTAGGGTAGAACATATAATAAGAGAGGAGAACATGATGGCTGCTCAAGAAATCATTGAACTCTTTTGTGAACTTATTGCAGTCCGCCTTCCAATTATTGAATCTCAAAGGGAATGTCCCCTTGACTTGAAGGAAGCCATATCTAGTGTATGTTTTGCTGCACCAAGGTGTGCAGATTTGCCAGAGTTGTTGCAGGTTCAGATGCTATTTGCTGCCAAATATGGGAAGGAATTTTTATCTGCTACGACTGAGCTCAGGCCAGACTGTGGTGTTAATCGCCAGTTGATAGAGCTGCTTTCAATTCGTGCTCCTTCACCAGAAAAGAAACTGAACCTTCTAAAAGAAATTGCTGTTGAGCATGATTTAGATTGGGATCCAGAAGCTTCAGAAACTGAGTTCTTTAAAAAGCATGAAGATTTATTGAATGGCCCCACCCAATTCGTTAGTGGGTCTAAGTTGCCCCTTCCTGATGAAAAACACAATGAAGAGATGCACTCCACTCATGATGCACCCAATAAAGAACAACCTGATTCTGATTCTGGCTCCGACACATTAGAATTTCCTGAAGTTCCTAAGGTATCAGTCCAGCCAAATGCAAATGTTGCCACAGCTCCAGAAATGGTTACACCTTTGACTATGGAACCCCTCGAGGTTGATCTTGATTCACCAAGACATTCTGGAGATTTTGCAGATGCAAAACAGGAGCAAGTTGAAGATAGATCATCAGTTCACAAAGATGAACCCCACACTTCAATTTGCAAAACGGAGAATAAACAGTTTTTGCCATTCATCTCCCCTCCATCTGTATCATCTGGATCATTTTCTGCAAGACATAGTGACTCACCTCCCTCCTTCTCAAGCACAAAATCTGAAGGCAATGTGGACTTACAGGATGTGTTGGCTGCTGCCCATGCTGCTGCTGAAACTGCTGAACGTGCAGCAGCGGCAGCTCGCAGCGCGGCCAGCCTTGCTCAACTCCGAATTAATGAGCTGACAAAGAAGAAAAGTAGTGAACATGTGCCTGACAGCAGTAGCTCTGAGAACCCGTTTTATGCTGGTGGCAGTAATGAATCTCCAACAATAATAGAAAAGCATTTCACTGAGCAAAATACTGCAGGTAACTCTGATGTCCATAATGGAAACGATGTTGAACATCACCAGGATCATTATGCTTCCCCAGACTCTCATTCATCAAGTTTTCCCTCCTTTGAGACACTTAAGGAGGATTTTGCTTCTTCCCTACCCAATGATCATCGTGTATTGGATGACAAGTCCTCGAGTCACCAGCCTAAGAGATTACCTTCAATGGACGACGACTCGTATTTCTCATACCCCAACTTATTTACCTCTCAAAACTCTAATGTGGGATCTCAGGctcattcagataacagccgttcccctcattcagataacagccgttcccctcatGATCTGTGA 1614 0.4207 MAMFDSIFNKGFKAAKCKTLLKLTIPRIKLLRNRREIQLKNMRREIAKLLETGQEATARIRVEHIIREENMMAAQEIIELFCELIAVRLPIIESQRECPLDLKEAISSVCFAAPRCADLPELLQVQMLFAAKYGKEFLSATTELRPDCGVNRQLIELLSIRAPSPEKKLNLLKEIAVEHDLDWDPEASETEFFKKHEDLLNGPTQFVSGSKLPLPDEKHNEEMHSTHDAPNKEQPDSDSGSDTLEFPEVPKVSVQPNANVATAPEMVTPLTMEPLEVDLDSPRHSGDFADAKQEQVEDRSSVHKDEPHTSICKTENKQFLPFISPPSVSSGSFSARHSDSPPSFSSTKSEGNVDLQDVLAAAHAAAETAERAAAAARSAASLAQLRINELTKKKSSEHVPDSSSSENPFYAGGSNESPTIIEKHFTEQNTAGNSDVHNGNDVEHHQDHYASPDSHSSSFPSFETLKEDFASSLPNDHRVLDDKSSSHQPKRLPSMDDDSYFSYPNLFTSQNSNVGSQAHSDNSRSPHSDNSRSPHDL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00689 537 MobiDBLite consensus disorder prediction 313 351 - -
Gma02g00689 537 Gene3D - 5 192 IPR042277 -
Gma02g00689 537 MobiDBLite consensus disorder prediction 501 524 - -
Gma02g00689 537 Coils Coil 32 59 - -
Gma02g00689 537 MobiDBLite consensus disorder prediction 277 312 - -
Gma02g00689 537 MobiDBLite consensus disorder prediction 470 494 - -
Gma02g00689 537 MobiDBLite consensus disorder prediction 391 537 - -
Gma02g00689 537 PANTHER IST1 FAMILY MEMBER 1 518 IPR005061 GO:0015031
Gma02g00689 537 Pfam Regulator of Vps4 activity in the MVB pathway 18 181 IPR005061 GO:0015031
Gma02g00689 537 MobiDBLite consensus disorder prediction 204 351 - -
Gma02g00689 537 MobiDBLite consensus disorder prediction 401 437 - -
Gma02g00689 537 MobiDBLite consensus disorder prediction 214 239 - -
Gma02g00689 537 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 1 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00689 Gma-Chr2 6675777 6679946 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00689 - - gmx:100805899 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01437 16 33458650 33465611 Gma02g00689 02 6675777 6679946 GST