Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01433 ATGGGAGATAACAAGGACCATGATTTCTTTTCCCACAAATTCCCCACAACCTCTCAGGTGATGGAAGAGATGAAGGAGCTGTGGGGCATGGCTCTACCCATCACAGCTATGAACATGTTGGTGTTTGTGAGAGCAGTGGTTTCTGTTCTCTTTTTGGGTAGGCTTGGAAGCCTAGAGCTAGCAGGTGGTGCACTTTCCATAGGCTTCACCAACATAACAGGGTACTCTGTTCTTGTGGGTCTTGCAGCAGGCCTAGAACCTGTGTGCAGCCAAGCCTTTGGTAGCAAAAACTGGGACCTTCTCTCTCTCTCTCTCCAACGAATGGTCCTCATCCTCCTCATGGCAATAGTCCCCATAAGCCTCCTGTGGCTGAACCTCGAAAGGATCATGCTTTTCATGGGCCAAGACAGTGCCATCACAGGAATGGCATCACTCTACTGCTTCTACTCTCTCCCAGACCTTTTAACAAACACCTTACTACAACCCTTAAGGGTGTTTTTGAGGTCACAAAAAGTGACCAAACCTATGATGTATTGCTCCCTTGTGGCTGTTTTGTTCCATGTGCCATTGAACTATCTTTTGGTGGTGGTGATGGGGCTTGGGGTACCAGGGGTGGCCATGGCTTCAGTGATGACTAATCTAAACATGGTGGTGCTGATGGCAGGGTATGTGTGCGTGTGCAGGAAGAGGGAGGTGGTGCTGAAGTGGCGGTGTGGTGGTGGGGGAGTGGTGTGCTCTGGGTTGGGGCAGTTGATGGGGTTTGCTGTGCCTAGTTGCCTTATGATATGTTTGGAGTGGTGGTGGTACGAGATTGTGACTGTGCTGGCTGGGTACTTGCCACGTCCAACACTGGCTGTGGCTGCCACTGGTATTCTCATTCAGACAACTAGCATGATGTACACTGTCCCAATGGCACTTGCAGGCTGTGTTTCTGCCAGGGTAGGGAATGAGCTTGGAGCTGGGAAACCATACAAGGCAAAACTAGCAGCAACGGTTGCCTTAGGATGTGCTTTTGTGATAGGCTTCATCAATGTTACATGGACTGTGATATTGGGTCAAAGGTGGGCTGGGCTTTTCACCAACGACGAGCCCGTAAAAGCCTTGGTTGCATCAGTCATGCCGATTATGGGCCTGTGTGAGCTTGGGAACTGTCCACAAACCACGGGCTGTGGGATCCTTCGTGGCACGGCCCGACCTGGTATTGGGGCCCACATAAACCTAGGCTCATTCTACTTTGTGGGCACCCCAGTGGCCGTGGGCCTGGCCTTTTGGTTCAAGGTGGGGTTCAGTGGGCTTTGGTTTGGGCTTCTGTCGGCCCAGGTGGCATGTGCTGTGTCAATCCTCTATGTTGTGTTGGTGAGGACAGATTGGGAAGCTGAGGCTTTGAAGGCTGAGAAGCTCACTAGGATTGAAATGGGTAGTTGCAATGGGCTTAGGAATAAGGAAAATGAGAGAGATGAAGAAAGCAAAGGGCTCTTGGTGAATGGAAATGGGAACAACAAAGATGACACATGCTAA 1518 0.5072 MGDNKDHDFFSHKFPTTSQVMEEMKELWGMALPITAMNMLVFVRAVVSVLFLGRLGSLELAGGALSIGFTNITGYSVLVGLAAGLEPVCSQAFGSKNWDLLSLSLQRMVLILLMAIVPISLLWLNLERIMLFMGQDSAITGMASLYCFYSLPDLLTNTLLQPLRVFLRSQKVTKPMMYCSLVAVLFHVPLNYLLVVVMGLGVPGVAMASVMTNLNMVVLMAGYVCVCRKREVVLKWRCGGGGVVCSGLGQLMGFAVPSCLMICLEWWWYEIVTVLAGYLPRPTLAVAATGILIQTTSMMYTVPMALAGCVSARVGNELGAGKPYKAKLAATVALGCAFVIGFINVTWTVILGQRWAGLFTNDEPVKALVASVMPIMGLCELGNCPQTTGCGILRGTARPGIGAHINLGSFYFVGTPVAVGLAFWFKVGFSGLWFGLLSAQVACAVSILYVVLVRTDWEAEALKAEKLTRIEMGSCNGLRNKENERDEESKGLLVNGNGNNKDDTC 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01433 505 TIGRFAM matE: MATE efflux family protein 33 433 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma16g01433 505 PANTHER PROTEIN DETOXIFICATION 13 478 - -
Gma16g01433 505 MobiDBLite consensus disorder prediction 481 505 - -
Gma16g01433 505 CDD MATE_eukaryotic 23 463 IPR045069 GO:0042910|GO:1990961
Gma16g01433 505 Pfam MatE 33 193 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma16g01433 505 Pfam MatE 257 418 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma16g01433 505 PANTHER MULTIDRUG RESISTANCE PROTEIN 13 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01433 Gma-Chr16 33418812 33423699 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01433 K03327 - gmx:100800364 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01433 16 33418812 33423699 Gma16g01433 16 33418812 33423699 ECH
Gma16g01433 16 33418812 33423699 Gma02g00684 02 6640491 6644469 GST