Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00684 ATGGGTGATAACAAGGACCGGGATTTCTTTTCCCACAAATTCCCCACAACCTCTCAGGTGATGGAAGAGATGAAGGAACTGTGGGGCATGGCTCTACCCATAACAGCTATGAACATGTTGGTATTTGTGAGGGCAGTGGTTTCTGTACTCTTTTTGGGTAGGCTTGGAAGCCTGGAGCTCGCAGGTGGTGCACTTTCCATAGGCTTCACCAACATAACAGGGTACTCTGTTCTCGTGGGTCTTGCAGCAGGCCTAGAACCTGTGTGCAGCCAAGCCTATGGTAGCAAAAACTGGGACCTTCTCTCACTCTCTCTCCAACGCATGGTCCTCATCCTCCTCATGGCAATAGTCCCCATAAGCCTCCTATGGCTTAACCTAGAAAGGATCATGCTTTTCATGGGCCAAGACAGTGCCATCACAGGAATGGCATCACTCTACTGCTTCTACTCCCTCCCAGACCTTTTAACAAACACCTTGCTTCAACCCTTAAGGGTGTTTTTGAGGTCACAAAAAGTGACCAAGCCTATGATGTATTGCTCCCTTGTGGCTGTTCTGTTCCATGTGCCATTGAACTATCTTTTGGTGGTTGTGATGGGGCTTGGGGTGCCAGGGGTGGCCATGGCTTCGGTGATGACTAATCTGAACATGGTGGTGCTGATGGCAGGGTATGTGTGTGTGTGCAGGAAGAGGGAGGTGGTGGTGAAGTGGGGGTGTTGGGGTGTGGGTGGGGGAGTGGTGTGTTCTGGGTTGGGGCAGTTGATGGGTTTTGCTGTGCCTAGTTGCCTAATGATATGTTTGGAGTGGTGGTGGTACGAGATTGTCACTGTGCTGGCTGGGTACTTGCCACGTCCAACACTGGCTGTGGCTGCCACTGGTATTCTCATTCAGACAACTAGCATGATGTACACAGTCCCAATGGCACTTGCAGGCTGTGTTTCTGCCAGGGTAGGGAATGAGCTTGGAGCTGGAAAACCATACAAGGCAAAGCTAGCAGCAGTGGTTGCCTTAGGATGCGCTTTTGTGATAGGCTTCATCAATGTGACATGGACTGTGATTCTGGGTCAAAGATGGGCTGGGCTTTTCACCAATGATGAGCCCGTCAAAGCGTTGGTTGCATCAGTTATGCCAATTATGGGCTTGTGTGAGCTTGGAAACTGCCCACAAACCACGGGCTGTGGGATCCTTCGTGGCATGGCCCGGCCTGGTATTGGGGCTCACATAAACCTGGGCTCTTTCTACTTTGTGGGCACCCCGGTGGCAGTGGGCCTGGCATTTTGGTTCAAGGTTGGGTTCAGTGGGCTTTGGTTTGGGCTTCTGTCGGCCCAGGTTGCATGTGCTGTGTCAATCCTCTATGTTGTGTTGGTGAGGACAGATTGGGAAGCTGAGGCTTTGAAGGCTGAGAAGCTCACAAGGATTGAAATGGGTAGTTGCAATGGGCTTAGGAATAAGGAAAATGAGAGAGATGAAGAAAGAAAAGGGTTGTTGGTGAATGGAAATGGGAACAACAAAGATGACATTTGCTAA 1524 0.5052 MGDNKDRDFFSHKFPTTSQVMEEMKELWGMALPITAMNMLVFVRAVVSVLFLGRLGSLELAGGALSIGFTNITGYSVLVGLAAGLEPVCSQAYGSKNWDLLSLSLQRMVLILLMAIVPISLLWLNLERIMLFMGQDSAITGMASLYCFYSLPDLLTNTLLQPLRVFLRSQKVTKPMMYCSLVAVLFHVPLNYLLVVVMGLGVPGVAMASVMTNLNMVVLMAGYVCVCRKREVVVKWGCWGVGGGVVCSGLGQLMGFAVPSCLMICLEWWWYEIVTVLAGYLPRPTLAVAATGILIQTTSMMYTVPMALAGCVSARVGNELGAGKPYKAKLAAVVALGCAFVIGFINVTWTVILGQRWAGLFTNDEPVKALVASVMPIMGLCELGNCPQTTGCGILRGMARPGIGAHINLGSFYFVGTPVAVGLAFWFKVGFSGLWFGLLSAQVACAVSILYVVLVRTDWEAEALKAEKLTRIEMGSCNGLRNKENERDEERKGLLVNGNGNNKDDIC 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00684 507 TIGRFAM matE: MATE efflux family protein 33 435 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma02g00684 507 CDD MATE_eukaryotic 23 465 IPR045069 GO:0042910|GO:1990961
Gma02g00684 507 PANTHER PROTEIN DETOXIFICATION 13 480 - -
Gma02g00684 507 Pfam MatE 33 193 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma02g00684 507 Pfam MatE 259 420 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma02g00684 507 PANTHER MULTIDRUG RESISTANCE PROTEIN 13 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00684 Gma-Chr2 6640491 6644469 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00684 K03327 - gmx:100794753 942.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01433 16 33418812 33423699 Gma02g00684 02 6640491 6644469 GST