Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01292 ATGGCCGCTCCCGCCTCCAACGCTGTGCTCCTCGGAGACGTTCACTTCGACGACGTCGCCGCAAAGCCTTGCGGCGTTCACTTCCGCGGCGAAACGCGGCGAGGCGCGCTCCGAGCCACCGTGAATCTCCGAAAGCCGAAAACGTTGAGCGGTATTCTGAATTTCGGGTGTTCCACATCGGATGCAAGTTGGAGGAGCTGGAATCCGAGTTCGCTCCACAGGAACTCGTCCTTCGCTTGCTGCTCCGCCGAGACAACGCCGCATGTTCAGCACCTCGCAACCTCCACCTTCTCGATTGACCAGACTAATTTTGGTGGCGAGAGGTTGAAGCTGTTTTCGGGGTCATGTTACCTACCACATCCGGATAAGGAGGACACAGGTGGAGAGGATGCACATTTTATTTGCACAGATGAACAAGCAATTGGTGTTGCAGATGGTGTAGGTGGCTGGGCAGATGTTGGTGTTAATGCTGGACTCTTTGCTCGAGAACTCATGTCTCATTCTGTTAGAGCAATTGAAGAGGAACCCAAAAATTCTATTAATCCGGCTAGGGTTTTAGAGAAGGCTCACTCATGTACAAAGGCCAAGGGTTCATCAACAGCTTGTATCATTACCCTTACTGACACGGGACTACATGCCATTAATTTGGGTGACAGTGGGTTCATCGTGGTTAGAGATGGATGCACCATTTTCAGGTCCCCTGTTCAACAGCATGGCTTCAATTTTACATATCAACTGGAGAGTGGCAATGGAGGTGATCTACCCAGCTCTGGTGAGGTCTTTACAATACCTGTTGCCCCAGGAGATGTTGTCGTTGCTGGAACAGATGGATTGTTTGACAATCTGTACAATGATGAGGTCACTGAAGTTGTTTTACATTCAGTTAGAGCTGGACTAGAACCCCAAGTAACTGCTCAGAAGATAGCAGTACTGGCTCGTCAACGAGCACTGGACAGGAATAGGCCGACACCATTTTCTACGGCTGCTCAAGAGGCTGGGTTCCGTTATTATGGTGGCAAACTTGATGACATAACAGTTGTTGTGTCATACATAACCGGCTCAACATGTGTGAGTTTTTCGCCATCTTAG 1089 0.4977 MAAPASNAVLLGDVHFDDVAAKPCGVHFRGETRRGALRATVNLRKPKTLSGILNFGCSTSDASWRSWNPSSLHRNSSFACCSAETTPHVQHLATSTFSIDQTNFGGERLKLFSGSCYLPHPDKEDTGGEDAHFICTDEQAIGVADGVGGWADVGVNAGLFARELMSHSVRAIEEEPKNSINPARVLEKAHSCTKAKGSSTACIITLTDTGLHAINLGDSGFIVVRDGCTIFRSPVQQHGFNFTYQLESGNGGDLPSSGEVFTIPVAPGDVVVAGTDGLFDNLYNDEVTEVVLHSVRAGLEPQVTAQKIAVLARQRALDRNRPTPFSTAAQEAGFRYYGGKLDDITVVVSYITGSTCVSFSPS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01292 362 SMART PP2C_SIG_2 125 351 IPR001932 -
Gma16g01292 362 SMART PP2C_4 102 349 IPR001932 -
Gma16g01292 362 Pfam Stage II sporulation protein E (SpoIIE) 139 349 IPR001932 -
Gma16g01292 362 PANTHER PROTEIN PHOSPHATASE 1 355 - -
Gma16g01292 362 PANTHER PROTEIN PHOSPHATASE 2C 1 355 IPR039123 -
Gma16g01292 362 SUPERFAMILY PP2C-like 116 349 IPR036457 -
Gma16g01292 362 ProSiteProfiles PPM-type phosphatase domain profile. 115 351 IPR001932 -
Gma16g01292 362 Gene3D - 254 355 IPR036457 -
Gma16g01292 362 Gene3D - 122 243 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01292 Gma-Chr16 31510343 31514819 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01292 K17508 - gmx:100784475 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01292 16 31510343 31514819 Gma16g01292 16 31510343 31514819 ECH
Gma02g00532 02 5281270 5285756 Gma16g01292 16 31510343 31514819 ECH
Gma16g01292 16 31510343 31514819 Gma02g00532 02 5281270 5285756 GST
Gma11g00605 11 5038484 5041447 Gma16g01292 16 31510343 31514819 PCT
Gma16g01292 16 31510343 31514819 Gma11g00605 11 5038484 5041447 PCT