Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00605 ATGTCTGGCATTCTCTCAAGGCTGAATGCAACCATTTACTGTCGTATTCGGGAAGCAATAACAAGGCAACAAGGAGTGCCGACATCCTTGTACAGAAGTTCAACTTTGCCTCtttgttcgctcacttcaagtcacacacttcacacaaaatcaatgattactgcctcacattccaatgctatgctgggagatgtttatgcttatggcttaatctcaggtcgtggtagtgtgcgagacttcacaaagcctgctgtaggttgcttgaggggtagtgtgaatctaaggagactacaaccattgtatggtcctttgagttttgggtgttctacttttgatgctaataggaggatccgggattcgagtttgctgcatggatcatggctcaagaatttctcagcctcttcttctgcttgctactcagccggggctgcacatgctgtctcatttgatggaagccctcctgatgaacagcttgcaaattcctctttttcacctgacccAACTATTATTGGTGGTAAGCCCTTGAAGATGTTGTCAGGATCTTGTTACCTACCACATCCAGATAAGGAGGAGACAGGAGGAGAGGATGCTCATTTTATTTGCACGGATGAACAAGCAATTGGTGTTGCTGATGGTGTAGGTGGCTGGGCGGATGTTGGTGTTAATGCAGGACTGTTTGCACAGGAACTTATATCCAATTTAGTGAGAGCAATTCAAAAGGAGCCTAAAGGTTCTTTTAATCTGACAAGAGTGTTAAGGGAAGCTCACGCAAATACAAAGGTCAAGGGTTCATCAACAGCTTGTATTGTTGCTCTTACTGACAAGGGACTACATGCTATTAATTTGGGTGACAGTGGATTCATTGTGGTTAGAGATGGATGCACCATTTTCGAGTCCCCTTCTCAACAGCATGACTTCAATTTCCCATATCAGTTGGAGAGTGGGAATGGCGCTGATCTACCCAGCTCTGGTGAGGTTTTTACCATACCCGTTGCTTCAGGAGATGTGGTCATTTCTGGAACAGATGGTTTATTTGACAATTTGTACAACAGTGAGATCACTGGAGTTGTTGAACATGCAATTAGGGCTGGACTAGAGCCCCAAGTAACTGCTCAGAAGATAGCAGCACTGGCTCGTCAGCGAGCACTGTCCAAGAGTAGTCGGACACCATTTTCTACTGCTGCTGAAAAAGCTGGATTCTGTTATTATGGTGGCAAACTTGATGACATAACTGTTGTTGTCTCATACATATCAGGTTCAGTGAGTGAGTGA 1272 0.3066 MSGILSRLNATIYCRIREAITRQQGVPTSLYRSSTLPLCSLTSSHTLHTKSMITASHSNAMLGDVYAYGLISGRGSVRDFTKPAVGCLRGSVNLRRLQPLYGPLSFGCSTFDANRRIRDSSLLHGSWLKNFSASSSACYSAGAAHAVSFDGSPPDEQLANSSFSPDPTIIGGKPLKMLSGSCYLPHPDKEETGGEDAHFICTDEQAIGVADGVGGWADVGVNAGLFAQELISNLVRAIQKEPKGSFNLTRVLREAHANTKVKGSSTACIVALTDKGLHAINLGDSGFIVVRDGCTIFESPSQQHDFNFPYQLESGNGADLPSSGEVFTIPVASGDVVISGTDGLFDNLYNSEITGVVEHAIRAGLEPQVTAQKIAALARQRALSKSSRTPFSTAAEKAGFCYYGGKLDDITVVVSYISGSVSE 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00605 423 Pfam Stage II sporulation protein E (SpoIIE) 205 415 IPR001932 -
Gma11g00605 423 ProSiteProfiles PPM-type phosphatase domain profile. 178 417 IPR001932 -
Gma11g00605 423 Gene3D - 187 319 IPR036457 -
Gma11g00605 423 SMART PP2C_4 168 415 IPR001932 -
Gma11g00605 423 PANTHER PROTEIN PHOSPHATASE 2C 36 422 IPR039123 -
Gma11g00605 423 Gene3D - 320 422 IPR036457 -
Gma11g00605 423 SUPERFAMILY PP2C-like 181 415 IPR036457 -
Gma11g00605 423 PANTHER PROTEIN PHOSPHATASE 36 422 - -
Gma11g00605 423 SMART PP2C_SIG_2 177 417 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00605 Gma-Chr11 5038484 5041447 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00605 K17508 - gmx:100785804 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00605 11 5038484 5041447 Gma11g00605 11 5038484 5041447 ECH
Gma11g00605 11 5038484 5041447 Gma01g01805 01 53656519 53659079 ECH
Gma11g00605 11 5038484 5041447 Gma16g01292 16 31510343 31514819 PCT
Gma11g00605 11 5038484 5041447 Gma02g00532 02 5281270 5285756 PCT
Gma16g01292 16 31510343 31514819 Gma11g00605 11 5038484 5041447 PCT
Gma02g00532 02 5281270 5285756 Gma11g00605 11 5038484 5041447 PCT