Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01289 ATGAGACATAGGATATCGTATTTGATGGACGAGATCTGGGAGAGAGCTATGGAAACGGCGTTGGACGGCGAGAAGGACCACGCGGCGGCGCGGACGCTAACCCTAGACGGCGCCGTTAAGTGCGTGCAGGGGCGGTTACCTCCGCCGAGCCTTCTGGAGCGGTTCCAGAACCTGCAGCACCTATCGATAGCGAACGTCGGCGTTTCGTCGCTGGAGCAGTTTCCGCGGCTGAGGAATTTGCAGAAGCTGAACCTCTCCGACAACCGGATCGCCGGCGGGCTGGAGTTTCTCGTGCAGGCGGGGCTGGATTCGCTGCGCGACCTCGATTTGTCGAACAATCGGATTCAGTACATTGAGGATCTCGCGCCCCTCGCGCAGGTGAAGCTGGTCTCGCTGGATCTGTACGAGTGCCCCGTGACGCGCGTGAAGGACTATCGATCTAGGGTTTTCGGGTTGATCAAGTCGTTGAAGTACTTGGACAAGATGGATGCGGAGGAGAACGAGAGGCCCGAGAGTGACgacgaggacgaggatgaggacgaggaggaggaggaggagTTAGAAGAGGATGACCCCGGGAGCGGCGAGATTGACGGAGGTGAGGAGGATCGTCCGTTTGGGATTAACAATGGGCACAGTGAGGGCGCTGATGGTGTTGTTGATGCTGATGATGAGGAGGAGAGTGACGCGGATGAGGAGGAGACGGAGTCGTCGAGGCGGATGGTTGTTAATGGGGAGGGCCACCGGGAGAACGGTTTTCGGGTTGCGCCCGTCGAGGGTGACGACGTGGAGGAGGAGGATGACGAGGATGATTCCGGGGAGGAGATTGATGAGGAGGAGGGGGATGACGATGATGTGGTGGAGGTTCATGAGATTGAAGATAGTGATGATGAGGATGGAGTGGAGGAGTACGATGACGAGGACGATGACGAGGATGATGATGAGGAGGAGGAAGAGGTGGATAACGACGAGGGTGATTTTGCGGAACCCGAGAGTACCGGGAGGCTGACGAGTACTGAGGGGGAGATTGATGGGCATGAGCAGGGGGAGGAGGATGGGGATGAGGATGATAATGGGGAGACTGGGGAGGATGAGATGGGGGTCGAAGATGATGGGGAGTTTGAAGATGACGATGAAGAAGAAGACTATGGTGCTGGGTATCTTGTTCAGCCAGTTGGACAGTCTGATGCTCTCAATGCTGGAGGAGCTGATGTGGATGGTGGAAATGATGACGATGGTGAAGAGGAGGATGAAGTTGATGACGACGACGATGATCAGGTGTTGCCTCCTCCTGACTCTTCCCACAAGAGGAAGAGGGATGATGAAGAGGACGTGGACGACGATGACGATGTGGTAGCATTCACGAAGTCACCCAAGAAGCATCATTGA 1389 0.545 MRHRISYLMDEIWERAMETALDGEKDHAAARTLTLDGAVKCVQGRLPPPSLLERFQNLQHLSIANVGVSSLEQFPRLRNLQKLNLSDNRIAGGLEFLVQAGLDSLRDLDLSNNRIQYIEDLAPLAQVKLVSLDLYECPVTRVKDYRSRVFGLIKSLKYLDKMDAEENERPESDDEDEDEDEEEEEELEEDDPGSGEIDGGEEDRPFGINNGHSEGADGVVDADDEEESDADEEETESSRRMVVNGEGHRENGFRVAPVEGDDVEEEDDEDDSGEEIDEEEGDDDDVVEVHEIEDSDDEDGVEEYDDEDDDEDDDEEEEEVDNDEGDFAEPESTGRLTSTEGEIDGHEQGEEDGDEDDNGETGEDEMGVEDDGEFEDDDEEEDYGAGYLVQPVGQSDALNAGGADVDGGNDDDGEEEDEVDDDDDDQVLPPPDSSHKRKRDDEEDVDDDDDVVAFTKSPKKHH 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01289 462 MobiDBLite consensus disorder prediction 167 197 - -
Gma16g01289 462 MobiDBLite consensus disorder prediction 260 327 - -
Gma16g01289 462 MobiDBLite consensus disorder prediction 163 462 - -
Gma16g01289 462 MobiDBLite consensus disorder prediction 219 233 - -
Gma16g01289 462 SMART LRR_sd22_2 102 123 - -
Gma16g01289 462 SMART LRR_sd22_2 77 96 - -
Gma16g01289 462 SUPERFAMILY L domain-like 48 164 - -
Gma16g01289 462 MobiDBLite consensus disorder prediction 234 259 - -
Gma16g01289 462 PANTHER ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 14 456 IPR045081 -
Gma16g01289 462 MobiDBLite consensus disorder prediction 407 427 - -
Gma16g01289 462 ProSiteProfiles Leucine-rich repeat profile. 79 98 IPR001611 GO:0005515
Gma16g01289 462 ProSiteProfiles Leucine-rich repeat profile. 104 125 IPR001611 GO:0005515
Gma16g01289 462 Gene3D Ribonuclease Inhibitor 10 175 IPR032675 -
Gma16g01289 462 Pfam Leucine-rich repeat 64 173 - -
Gma16g01289 462 MobiDBLite consensus disorder prediction 345 384 - -
Gma16g01289 462 MobiDBLite consensus disorder prediction 428 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01289 Gma-Chr16 31453255 31456181 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01289 - - gmx:100783409 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00524 02 5221604 5225233 Gma16g01289 16 31453255 31456181 ECH
Gma16g01289 16 31453255 31456181 Gma16g01289 16 31453255 31456181 ECH
Gma16g01289 16 31453255 31456181 Gma02g00524 02 5221604 5225233 GST