Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00524 ATGAGACATAGGATATCGTATTTGATGGACGAGATCTGGGAGAGGGCTGTGGAAACGGCGTTGGACGGCGAGAAAGACCACGCGGCCGCGCGGACGCTAACCCTAGACGGCGCCGTTAAGTGCGTCCAGGGGCGGTTACCCCCGCCTAGCCTTCTGGAGCGGTTCCAGAACCTGCAGCACCTCTCAATAGCAAACGTCGGCGTTTCGTCGCTGGAGCAGTTTCCCCGGCTGAGGAACCTGCAGAAGCTGAACCTTTCCGACAACCGGATCGCCTCCGGGCTCGAATTTCTCGTGCAGGCCGGGCTCGATTCGCTTCGCGACCTCGATTTGTCGAACAATCGGATTCAGTACATTGAGGATCTCGCGCCGCTCGCGCAGTTGAAGCTGGTGTCGCTGGATCTGTACGAGTGCCCCGTGACGCGCGTGAAGGACTATCGATCTAGGGTTTTCGGGTTGATCAAGTCGTTGAAATACTTGGACAAGATGGACGCGGAGGAGAACGAGAGGCCCGAGAGTGACGACgaggaggaggatgaggaggaggaggaggaagaggaTGACCCTGGGAGCGGTGAGATTGACGGCGGTGAGGAGGATCGGCCGTTTGGGATTAACAATGGGCACAGTGAGGGTGCTGATGGCGTTGTCGATGCTGATGATGAGGAGGAGAGTGACGCGGATGAGGAGGAGACGGAGTCGTCGAGGCGGATGGTTGTTAATGGAGAGGGCCATCGGGAGAATGGTCTTGGGGTTGCGCCAGTGGAGGGGGACGATGTTGAGGAGGAAGATGATGAGGATGATTCTGGTGAGGAGATTGATGAGGAGGAGGGGGATGATGATGATGTGGTGGAGGTTCATGAGATTGAGGATAGTGATGATGAGGATGGAGTGGAGGAGTatgatgaggacgatgatgacgaggacgacgatgaGGAAGAAGAGGTGGATAACGACGAGGGTGATTTTGTGGAGCCTGAGAGAACCGGGAGGTTGACGAGTACTGAGGGTGAGATTGATGGGCATGAGCAGGGGGAAGAGGATGGGGATGAGGATGATAATGGGGAGACTGGGGAGGATGAGATTGGGGTTGAAGATGATGGAGACTTTGAAGATGACGATGAAGAAGAAGACTATGGTGCTGGGTATCTTGTTCAGCCAGTTGGACAGTCtgatgctgtcaatgctgcagttgctgatgtagatggtggaaatgatgatggtgaagagaaggatgaagttgatgacgacgatgaggatgatgttcaggtgttgcctcctcctgaatcttcccaccttaagaggaagagggaTGATGATGAAGAGGACGAGGACAGTGACAATGATGATGATGAAGATGTGGTAGCATTCACGAAGTCACCCAAGAAGCATCATTGA 1395 0.4674 MRHRISYLMDEIWERAVETALDGEKDHAAARTLTLDGAVKCVQGRLPPPSLLERFQNLQHLSIANVGVSSLEQFPRLRNLQKLNLSDNRIASGLEFLVQAGLDSLRDLDLSNNRIQYIEDLAPLAQLKLVSLDLYECPVTRVKDYRSRVFGLIKSLKYLDKMDAEENERPESDDEEEDEEEEEEEDDPGSGEIDGGEEDRPFGINNGHSEGADGVVDADDEEESDADEEETESSRRMVVNGEGHRENGLGVAPVEGDDVEEEDDEDDSGEEIDEEEGDDDDVVEVHEIEDSDDEDGVEEYDEDDDDEDDDEEEEVDNDEGDFVEPERTGRLTSTEGEIDGHEQGEEDGDEDDNGETGEDEIGVEDDGDFEDDDEEEDYGAGYLVQPVGQSDAVNAAVADVDGGNDDGEEKDEVDDDDEDDVQVLPPPESSHLKRKRDDDEEDEDSDNDDDEDVVAFTKSPKKHH 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00524 464 MobiDBLite consensus disorder prediction 402 423 - -
Gma02g00524 464 Coils Coil 162 182 - -
Gma02g00524 464 MobiDBLite consensus disorder prediction 163 464 - -
Gma02g00524 464 ProSiteProfiles Leucine-rich repeat profile. 79 98 IPR001611 GO:0005515
Gma02g00524 464 MobiDBLite consensus disorder prediction 255 321 - -
Gma02g00524 464 MobiDBLite consensus disorder prediction 215 229 - -
Gma02g00524 464 MobiDBLite consensus disorder prediction 167 193 - -
Gma02g00524 464 Pfam Leucine-rich repeat 64 173 - -
Gma02g00524 464 Gene3D Ribonuclease Inhibitor 13 178 IPR032675 -
Gma02g00524 464 MobiDBLite consensus disorder prediction 340 379 - -
Gma02g00524 464 SMART LRR_typ_2 77 100 IPR003591 -
Gma02g00524 464 SMART LRR_typ_2 102 125 IPR003591 -
Gma02g00524 464 SMART LRR_sd22_2 102 123 - -
Gma02g00524 464 SMART LRR_sd22_2 77 96 - -
Gma02g00524 464 MobiDBLite consensus disorder prediction 322 339 - -
Gma02g00524 464 SUPERFAMILY L domain-like 48 164 - -
Gma02g00524 464 ProSiteProfiles Leucine-rich repeat profile. 104 125 IPR001611 GO:0005515
Gma02g00524 464 PANTHER ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 14 462 IPR045081 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00524 Gma-Chr2 5221604 5225233 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00524 - - gmx:100809629 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00524 02 5221604 5225233 Gma16g01289 16 31453255 31456181 ECH
Gma02g00524 02 5221604 5225233 Gma02g00524 02 5221604 5225233 ECH
Gma16g01289 16 31453255 31456181 Gma02g00524 02 5221604 5225233 GST