Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01285 ATGTTCCTTCTTAGAAGGCAAACCCAGAATCACCATGAGAATGATTCCTCATATCAAGATACAAAGGTGGCTGAACTCAAGACAGCTCTTGGGCCCCTCTCTGGTCGTCAATTAAAGTATTGCACAGATGCATGTCTAAGGAGATATTTAGAAGCAAGGAACTGGAATGTTGATAAAACCAAGAAAATGCTGGAGGAAACACTTGAGTGGAGGGCAACTTATAGGCCAGAGGAAATCCGTTGGGCTGAAATAGCACATGAGGGTGAGACAGGCAAAGTCTCCAGAGCTAACTTTCATGATCGACATGGGAGGGCTGTGCTTATTATGAGGCCAGGGATGCAGAATACAACATCGGCTGAAGATAATATCAGGCATTTAGTCTATCTGTTGGAAAATGCTATCCTGAATCTTTCTGAAGGTCAAGAACAAATGTCATGGTTGATAGACTTCACAGGATTATCACTTAGTACAAATATATCTGTTAAAACATCTCGTGATATTATTCACATTTTACAAAACCACTATCCAGAAAGGCTTGCTATCGCTTTTCTGTACAATCCCCCAAGAATATTTCAGGCTTTCTGGAAGGCCATCAGATTCTTCCTGGATCCCAACACAGTCCAGAAGGTGAAGTTTGTTTATCCTAACAATAAGGACAGTGTGGAGCTGATGAAATCACTCTTCGACATGGAAAACCTTCCAAGTGAATTTGGGGGGAAAACAAGTTTAAAGTATGACCATGAAGAGTTCTCGCGATTGATGACTGAGGATGATGTGAAAACTGCCAAGTTCTGGGGACTTGATGAGGAGCCCTTCAACCCTCCTAAGAAGGGGCATTCTGGAGCAGAGGTGGCACCAGAACCAGTGCCTGTTCAGGCAGTAGTTAGTTAG 891 0.4299 MFLLRRQTQNHHENDSSYQDTKVAELKTALGPLSGRQLKYCTDACLRRYLEARNWNVDKTKKMLEETLEWRATYRPEEIRWAEIAHEGETGKVSRANFHDRHGRAVLIMRPGMQNTTSAEDNIRHLVYLLENAILNLSEGQEQMSWLIDFTGLSLSTNISVKTSRDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAIRFFLDPNTVQKVKFVYPNNKDSVELMKSLFDMENLPSEFGGKTSLKYDHEEFSRLMTEDDVKTAKFWGLDEEPFNPPKKGHSGAEVAPEPVPVQAVVS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01285 296 CDD SEC14 99 240 IPR001251 -
Gma16g01285 296 MobiDBLite consensus disorder prediction 1 20 - -
Gma16g01285 296 PANTHER GH16843P 6 295 - -
Gma16g01285 296 SMART CRAL_TRIO_N_2 42 67 IPR011074 -
Gma16g01285 296 Gene3D - 3 270 IPR036865 -
Gma16g01285 296 Pfam CRAL/TRIO, N-terminal domain 42 66 IPR011074 -
Gma16g01285 296 SUPERFAMILY CRAL/TRIO domain 82 258 IPR036865 -
Gma16g01285 296 SMART sec14_4 87 242 IPR001251 -
Gma16g01285 296 PANTHER DIVERGENT CRAL/TRIO DOMAIN PROTEIN 6 295 - -
Gma16g01285 296 MobiDBLite consensus disorder prediction 272 296 - -
Gma16g01285 296 SUPERFAMILY CRAL/TRIO N-terminal domain 8 82 IPR036273 -
Gma16g01285 296 Pfam CRAL/TRIO domain 93 239 IPR001251 -
Gma16g01285 296 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 81 245 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01285 Gma-Chr16 31360591 31364449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01285 46 234 Acyl Lipid Metabolism Gene Families AT1G55840 29.268 4.45e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01285 - - gmx:100782334 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01285 16 31360591 31364449 Gma16g01285 16 31360591 31364449 ECH
Gma02g00518 02 5150604 5159761 Gma16g01285 16 31360591 31364449 ECH
Gma16g01285 16 31360591 31364449 Gma02g00518 02 5150604 5159761 GST