Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01213 ATGGCAGTTCCAGCAGAGAGGAACCACAACCATTTCTCAGTTTTGATCGTACTCTTTCTTTTCCTCGTCCACAATGCTCTCTGCATTAGGTTCCCGGATCGGATCGCCCAACCCGCCCTCGACCCGCTCGACCAACACCGCCTGCGGGTCGCCGTCTTCGCCCTCGGAAGCTTCTGGAGATCCGAAGCGGTGTTCGGTTGTTTACCGGGCGTTGTTCGCACCACCGTCGGCTACGCCGGCGGATCCAAGTCCAACCCCGAATACCGAAGCCTCGGTGACCACGCCGAGTCCGTTAAGGTTGAGTATGATCCGCAGCTGATTAGCTTTAGGGAACTCCTGGATGTCTTTTGGTCAAGTCACGATCCTAGGCAAGTGTATGGCCAAGGTCCTGATGTGGGTAGTCAGTACAGATCTATTATTTTTGTTAATGGAACCGAAGAATCAAGAATGGCTGCTGTCAGCAAAGAACAGGAACAAACCCTGTCAAGAAGCAGCATTGTGACTACACAAATTCTGCAACTTGGAACATTTTACCCTGCAGAGCCAGAGCACCAGAAATTTGAACTCAAGCAAAATACCATCCTTCTTCAGTTAATTGGGAACCTTCCGGCAGAGGAGCTTGAGAGGTCTAGCCTGGCAACGAAATTGAATGGATATGTTGCAGAGCTTTGCCCTCCAAATATCCAAAAGCAAATTGATGCCAAGATCAACAATATTATTAAAAAGGGTTGGCCAATTTTGAGAGATTTGTAG 753 0.4914 MAVPAERNHNHFSVLIVLFLFLVHNALCIRFPDRIAQPALDPLDQHRLRVAVFALGSFWRSEAVFGCLPGVVRTTVGYAGGSKSNPEYRSLGDHAESVKVEYDPQLISFRELLDVFWSSHDPRQVYGQGPDVGSQYRSIIFVNGTEESRMAAVSKEQEQTLSRSSIVTTQILQLGTFYPAEPEHQKFELKQNTILLQLIGNLPAEELERSSLATKLNGYVAELCPPNIQKQIDAKINNIIKKGWPILRDL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01213 250 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE A5 10 249 - -
Gma16g01213 250 Pfam Peptide methionine sulfoxide reductase 51 191 IPR002569 GO:0008113
Gma16g01213 250 Gene3D Peptide methionine sulphoxide reductase MsrA 44 244 IPR036509 GO:0008113
Gma16g01213 250 SUPERFAMILY Peptide methionine sulfoxide reductase 38 191 IPR036509 GO:0008113
Gma16g01213 250 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 10 249 - -
Gma16g01213 250 TIGRFAM msrA: peptide-methionine (S)-S-oxide reductase 50 190 IPR002569 GO:0008113
Gma16g01213 250 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 48 202 IPR002569 GO:0008113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01213 Gma-Chr16 29841984 29846211 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01213 K07304 - gmx:100802671 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01213 16 29841984 29846211 Gma16g01213 16 29841984 29846211 ECH
Gma16g01213 16 29841984 29846211 Gma02g00451 02 4535625 4543691 GST