Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00451 ATGGCAGTTCCAGAGAGGAACCATAACCATTATCATCATTTCTCAGTGTTGATCGTCCTCATACTCGTCGACAATGCTCTCTGCATCAGGTTCCCGGATCGGATCGCCCAACCCGCCCTCGACCCGGGAGACCAACACCGCCTGCATGTCGCCGTCTTCGCCCTCGGCAGCTTCTGGAGATCCGAAGCGGTGTTCGGCTGCTTGCCCGGCGTCGTTCGCACCACCGTCGGCTACGCCGGCGGATCCAAACCCAACCCCGAATATCGAAGCCTCGGTGACCACGCCGAGTCCGTCAAGGTCGAGTATGACCCACAGCTGATTAGCTTTAGGGAACTCCTGGATGTCTTTTGGTCAAGTCATGATCCTAGGCAAGTGTATGGCCAAGGTCCTGATGTGGGTAATCAGTACAGATCTATTATTTTTGTTAATGGAACCGAAGAATCAAGAATGGCTGCTGTCAGCAAAGAACAGGAACAAACCAGGTCAAGAAGCAGCATTGTGACTACTCAAATTCTGCAACTTGGAACATTTTACCCTGCAGAGCCAGAGCACCAGAAATTTGAACTCAAGCAAAATACCATCCTTCTTCAGTTAATTGGGAACCTTCCTGCAGAGGAGCTTGAGAGGTCTAGCCTGGCAACAAAATTGAATGGATATGTGGCCGAGCTTTGCCCTCCAAATATCCAAAAGCAAATTGATGCCAAGATCAACGATATTATTAAAAAGGGGCGAGTGACCGGAGCGGCGAAGATAGAGTCAGATCGGAAGCGGAAGAAGGCGTCGACCTCGGCGGCGGAGAAGGAGAAGGAGAACCGCAATAAGACTAAGAAGTCGAAGATGTCGTCGTCGTCGTCGAAgactggtggcggtggtgaggttagggcttcgcacatattgataaagcacgaaggttctagaaggaaggcctcgtggaaggatccagaaggccgcatcatcaagagcacaaccagagaaaacgcggtttctcagctcaaggccctccgcgacgacatcgtttcgggcaaggccacttttgaggacatcgcctctcgcttctccgattgcagctccgccaagcgcggcggtgatctcgGTCCTTTTGGTCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACTTTTGCTCTTAAAATTGGTGAAATAAGTGACATTGTGGATACTGACAGCGGAGTCCACATTATTAAGAGAACAAAATGA 1218 0.4007 MAVPERNHNHYHHFSVLIVLILVDNALCIRFPDRIAQPALDPGDQHRLHVAVFALGSFWRSEAVFGCLPGVVRTTVGYAGGSKPNPEYRSLGDHAESVKVEYDPQLISFRELLDVFWSSHDPRQVYGQGPDVGNQYRSIIFVNGTEESRMAAVSKEQEQTRSRSSIVTTQILQLGTFYPAEPEHQKFELKQNTILLQLIGNLPAEELERSSLATKLNGYVAELCPPNIQKQIDAKINDIIKKGRVTGAAKIESDRKRKKASTSAAEKEKENRNKTKKSKMSSSSSKTGGGGEVRASHILIKHEGSRRKASWKDPEGRIIKSTTRENAVSQLKALRDDIVSGKATFEDIASRFSDCSSAKRGGDLGPFGRGQMQKPFEEATFALKIGEISDIVDTDSGVHIIKRTK 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00451 405 SUPERFAMILY Peptide methionine sulfoxide reductase 45 191 IPR036509 GO:0008113
Gma02g00451 405 TIGRFAM msrA: peptide-methionine (S)-S-oxide reductase 51 190 IPR002569 GO:0008113
Gma02g00451 405 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 48 202 IPR002569 GO:0008113
Gma02g00451 405 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE A5 10 243 - -
Gma02g00451 405 Gene3D Peptide methionine sulphoxide reductase MsrA 44 262 IPR036509 GO:0008113
Gma02g00451 405 Pfam Peptide methionine sulfoxide reductase 51 191 IPR002569 GO:0008113
Gma02g00451 405 MobiDBLite consensus disorder prediction 296 313 - -
Gma02g00451 405 MobiDBLite consensus disorder prediction 247 313 - -
Gma02g00451 405 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 10 243 - -
Gma02g00451 405 Gene3D - 290 405 IPR046357 GO:0003755
Gma02g00451 405 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 290 405 IPR000297 GO:0003755
Gma02g00451 405 Pfam PPIC-type PPIASE domain 297 404 IPR000297 GO:0003755
Gma02g00451 405 SUPERFAMILY FKBP-like 291 404 - -
Gma02g00451 405 MobiDBLite consensus disorder prediction 247 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00451 Gma-Chr2 4535625 4543691 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00451 K07304 - gmx:100782739 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00451 02 4535625 4543691 Gma02g00451 02 4535625 4543691 ECH
Gma16g01213 16 29841984 29846211 Gma02g00451 02 4535625 4543691 GST