Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01200 ATGGCACCAACGGCCAAGACTGATCTGGCTTACCTGGCTCAGGAGAAGACCCTGGAATTGAGCTTCGTTCGGGATGAAGACGAGCGTCCAAAGGTTGCGTACAATGAATTCAGCAATGAGGTCCCGGTGATTTCTCTGGCCGGAATCCACGAGGTGGGTGGTCGTAGAGAAGAGATTTGCAAGAAGATTGTGGAGGCTTGCAAGAATTGGGGTATCTTCCAAGTTGTTGATCACGGTGTGGATCAACAACTCATGGCCGAGATGACCCGTCTTGCCAAAGAGTTCTTTATCTTGCCACTGGACGAAAAGATTCGCTTTGATATGTCCGGTGGCAAAAGGGGAGGATTCAACGTCTCTAGTCATCTCCGAGGTGAGTCCGTGCAGGACTGGAGAGAGATAGTGATATACTTTTCCTACCCAATGAGAGAGAGGGACTATACAAGGTGGCCAGACACTCCAAAAGGGTGGAGATCAGTGACCGAATCATACAGCGAGAAGCTAATGGCTCTAGCTTGCAATCTCTTGGAGGTGTTGTCAGAGGCAATGGGGTTGGAGAAAGAGGCTTTAACCAAAGCATGTGTTGACATGGACCAGAAGATTGTGGTGAATTACTACCCTAAGTGCCCACAACCTGACCTCACTCTTGGCCTCAAGCGCCACACTGATCCTGGCACCATCACATTGCTGCTTCAGGACCAAGTGGGTGGACTCCAAGCCACCAGGGACAATGGGAAAACGTGGATCACCGTTCAGCCTGTGGAGGGTGCCTTCGTTGTCAATCTTGGAGACCATTGTCATTATCTGAGCAATGGAAGGTTCAAGAGTGCTGATCATCAAGCGGTGGTGAACTCAAACCATAGCCGTTTGTCCATAGCCACGTTTCAAAACCCTGTACCAAATGCAACTGTGTACCCTCTCAAGGTTAGAGAGGGAGAGAAGCCTGTGATGGAGGAACCAATCACTTTTGCTGAAATGTACAGGAGGAAGATGAGCAAGGACCTTGAGATTGCAGGGATGAAGAAGCTGGCTAAGAAAAAGGACTTTGAGAATGAAAAGCATTTCCAAGAACTTGAGAAGGCAAAAGTTGAGGCCAAGCCTTTGAAGGAGATTCTTGCCTAA 1119 0.4888 MAPTAKTDLAYLAQEKTLELSFVRDEDERPKVAYNEFSNEVPVISLAGIHEVGGRREEICKKIVEACKNWGIFQVVDHGVDQQLMAEMTRLAKEFFILPLDEKIRFDMSGGKRGGFNVSSHLRGESVQDWREIVIYFSYPMRERDYTRWPDTPKGWRSVTESYSEKLMALACNLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDNGKTWITVQPVEGAFVVNLGDHCHYLSNGRFKSADHQAVVNSNHSRLSIATFQNPVPNATVYPLKVREGEKPVMEEPITFAEMYRRKMSKDLEIAGMKKLAKKKDFENEKHFQELEKAKVEAKPLKEILA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01200 372 Pfam 2OG-Fe(II) oxygenase superfamily 198 296 IPR044861 -
Gma16g01200 372 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 12 352 - -
Gma16g01200 372 Coils Coil 345 365 - -
Gma16g01200 372 PANTHER NARINGENIN,2-OXOGLUTARATE 3-DIOXYGENASE 12 352 - -
Gma16g01200 372 Pfam non-haem dioxygenase in morphine synthesis N-terminal 41 150 IPR026992 -
Gma16g01200 372 Gene3D - 9 336 IPR027443 -
Gma16g01200 372 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 193 297 IPR005123 -
Gma16g01200 372 SUPERFAMILY Clavaminate synthase-like 13 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01200 Gma-Chr16 29633373 29635759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01200 40 348 Glycosyltransferase AT5G59530 31.861 2.09e-44 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01200 K00475 - gmx:100799462 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01200 16 29633373 29635759 Gma16g01200 16 29633373 29635759 ECH
Gma02g00443 02 4494008 4496600 Gma16g01200 16 29633373 29635759 ECH
Gma16g01200 16 29633373 29635759 Gma02g00443 02 4494008 4496600 GST