Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00443 ATGACCCGTCTCGCCAAAGAGTTCTTTGCTTTGCCGCCGGACGAGAAGCTTCGTTTTGATATGTCCGGTGCCAAAAAGGGTGGATTCATTGCCTCCAGCCATCTCCAAGGAGAGTCAGTGCAGGACTGGAGAGAAATAGTGATATACTTTTCGTACCCAAAAAGAGAGAGGGACTATTCAAGGTGGCCACACAAGCCAGAAGGGTGGAGATGGGTGACTGAGGAATACAGCGAGAAGCTAATGGGTCTAGCTGGGAAGCTCATGGAGGTGTTGCCCGAAGCAATGGGGTTAGAGAAAGAGGGTTTAAGCAAAGCATGTGTTGACATGGACCAGAAGGTGGTGGTTAATTACTACCCCAAATGCCCTCAACCTGACCTCACTCTTGGCCTGAAGCGCCACACGGATCCGGGCACCATCACCTTGCTGCTTCAGGACCAAGTGGGTGGACTTCAAGCCACCAGGGACAATGGCAAATCATGGATCACCGTTCAGCCTGTGGAGGCTGCCTTCGTTGTCAATCTTGGAGATCATGCTCATTATCTGACCAATGGAAGGTTCAAGAATGCTGATCACCAAGCGGTGGTGAACTCAAATCATAGCCGTTTGTCCATAGCCACGTTTCAAAACCCAGCACCAAATGCAACTGTTTACCCTCTGAAGATAAGAGAGGGAGAGAAGCCTGTGATGGAGGAACCAATCACTTTTGCTGAAATGTACAGGAGGAAGATGAGCAAGGACCTTGAGATTGCAAGGATGAAGAAGCTGGCTAAGGAAAATCATTTGCAGGACCTTGAGAACGAAAAGCATTTGCAAGAACTTGATCAGAAGGCAAAACTTGAGGCCAAGCCTTTGAAGGAGATTCTTGCTTAA 870 0.4874 MTRLAKEFFALPPDEKLRFDMSGAKKGGFIASSHLQGESVQDWREIVIYFSYPKRERDYSRWPHKPEGWRWVTEEYSEKLMGLAGKLMEVLPEAMGLEKEGLSKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDNGKSWITVQPVEAAFVVNLGDHAHYLTNGRFKNADHQAVVNSNHSRLSIATFQNPAPNATVYPLKIREGEKPVMEEPITFAEMYRRKMSKDLEIARMKKLAKENHLQDLENEKHLQELDQKAKLEAKPLKEILA 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00443 289 Pfam 2OG-Fe(II) oxygenase superfamily 111 209 IPR044861 -
Gma02g00443 289 PANTHER NARINGENIN,2-OXOGLUTARATE 3-DIOXYGENASE 1 269 - -
Gma02g00443 289 Coils Coil 247 267 - -
Gma02g00443 289 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 106 210 IPR005123 -
Gma02g00443 289 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 1 269 - -
Gma02g00443 289 Gene3D - 1 250 IPR027443 -
Gma02g00443 289 SUPERFAMILY Clavaminate synthase-like 2 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00443 Gma-Chr2 4494008 4496600 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00443 66 220 Glycosyltransferase AT5G59530 40.506 1.72e-34 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00443 K00475 - gmx:100780057 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00443 02 4494008 4496600 Gma02g00443 02 4494008 4496600 ECH
Gma02g00443 02 4494008 4496600 Gma16g01200 16 29633373 29635759 ECH
Gma16g01200 16 29633373 29635759 Gma02g00443 02 4494008 4496600 GST