Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01181 ATGGGAAACTTAGCTGCAGAGTCTCTCTGTGCTTTATTGTTGCTATGTTTCTATGGCAAACTTATAGTTAGTGCTAAATACATGAAGTATAATACTGGGGCCAGTATTGTGCCAGGAAAATTGAATGTTCACTTGGTTCCACACTCCCATGACGATGTTGGTTGGCTGAAAACCATTGATCAGTACTATGTTGGGTCAAACAATAGTATCCAGGGGGCATGTGTTGAGAATGTGTTGGACTCGGTGGTTGTATCTCTTCAGAAAGACCCAAATAGAAAGTTTGTGTTTGCCGAAATGGCATTTTTCCATCGATGGTGGGTAGAACAAAGTCCAGAAACACAAGAACAAGTGAGAAAGCTTGTGGATGCGGGGCAGCTAGAATTCATAAATGGTGGTTGGTGTATGCACGATGAAGCTGCAACACACTACATAGACATGATTGATCAAACCACTTTGGGCCATCGCTTTATCAAGGACCAGTTTAACAAGACTCCTACTGTTGGATGGCAGATTGATCCATTTGGTCACTCTGCTGTGCAGGCTTACCTGCTGGGAGCTGAGCTTGGTTTTGATTCTATACATTTCGCAAGGATTGATTATCAAGACAGAGCTAAGCGCAAAGCTGATAAGTCTCTTGAAGTTGTTTGGCGTGGCTCCAAAACATTCGGTTCTTCAGCTCAGATTTTTGCCAATACTTTCCCTGTTCATTATAGTGCTCCAAATGGTTTCAACTTTGAAGTCAATAATCCTGATGTTGATGTTGGTCCCGTACAGGATGATCCTCTTATTTTCGATTACAATGTTAAACAACGTGTCAAAGAATTTATTGATGCTGCTACTACCCAAGCAAACGTGACGAGGACAAATCATATAATGTGGACAATGGGTGATGATTTCCAGTACCAATATGCAGAGTCTTGGTTCAAGCAAATGGATAAGTTAATTCACTATGTTAATAAGGATGGAAGAGTAAATGCTTTGTATTCCACTCCATCTATTTACACCAATGCCAAAAATGCTGCTAATCAACTTTGGCCACTGAAAACAGATGATTACTTCCCGTATGCTGATAGTCCAAATGCTTATTGGACGGGCTATTTCACTAGTCGCCCAGCCTTAAAACGATATGTTAGGATGCTAAGTGGATACTATTTGGCAGCACGTCAACTTGAATTCTTGGTTGGAAAGCAATCAACTAAATACAATACTTATGACCTTGGAGATGCTCTAGGAATTGCACAACATCATGATGCTGTCAGTGGCACTGCCAAGCAGCATACAACCAATGACTATGCCAAAAGATTGGCTATTGGAGCCTATGAGGCTGAAGCGGTTGTTAGTTCTTCTTTGGCTTGTCTTACTAGAAAACAATCAGGTGATAAGTGTTCAACACCTGCATCGGCATTTGCCCAGTGTCAATTGTTAAATATTAGTTACTGCCCTCCGGCAGAAGACAACATTCCAGAGGCTAAGAGTTTGGTAGTAGTGGTGTATAACCCACTTGGGTGGAATCGTACTGACATTGTCAAAATACCGGTTAATGATGCTAATCTTGTTGTCAAAGATTCATCGGGCAATAAACTAGAAGTACAATATGTGGATGTGGATGATGTTACGACAAATTTAAGAAAATTCTATGTGAAGGCCTACGTGGGGGTGTCACCAAAACAATCCCCAAAGTACTGGCTTTTGTTTCAGGTTTCAGTACCTCCACTTGGATGGAGTACATACTTCATTTCTAAAGCAACTAGAAAAGGGACTAGGAGAAAAGATTTATCTCACACCAACAGTCAGAAAGGTGACACCATAAACATTGGGTCGGGAAATTTAAAGATGTCCTTTTCCTCAACATCTGGACAACTCAAAAGGATGTATAATTCCAGAACTGGAGTTGATATACCTATTCAGCAAAGCTACCTTTGGTATGGATCTAGTGAGGGCGATAGTGATCCTCAGGCTTCTGGTGCATATATATTTCGGCCAAACGGATCCCCCCCAAATATCGTTTCAAGATCAGTGCCTACAAAGGTAATTCGTGGACCACTAGTTGATGAAGTTCATCAGAAATTTAGCTCTTGGATTTACCAGGTTACTAGGCTTTACAAAGACAAAGAACATGCTGAAATCGAATTCACTATTGGTCCAATTCCTACTGATGATGGAGTTGGAAAAGAGGTGATCACACGAATGACAGCAAATATGGCCACAAACAAGGAGTTTTATGCGGATTCCAATGGAAGAGATTTTCTAAAACGAGTTCGAGATCATAGGGAAGATTGGCCTCTGCAAGTAACTCAACCAGTAGCAGGAAACTATTACCCACTTAATCTTGGAATTTATACTAAGGATGAAAAATCTGAGTTCTCAGTGTTAGTTGATCGTGCCACTGGTGGAGCCAGCATCAAAGATGGTGAGGTGGAATTGATGCTTCACAGGCGTATTCTCCATGATGATAGTCGAGGAGTTGGGGAACCACTTGATGAACAAGTTTGCGTGAACAATAATAATACTTGCGAAGGACTAACAGTCAGAGGAAATTATTATATCAGCATCCACAAGCTTGGAGTTGGTTCACGCTGGCGTCGTACAACTGGTCAGGAAATTTATTCTCCATTCTTAGTGGCTTTTACACATGAGATCTCGGAAAATTGGAAGTCCTCTCATTTGACGAAAGGAACTATCATGGATCCAAATTACAGCTTGCCTCCCAATATTGCTTTGATAACTCTTGAGGAGTTGGATGGTGGAATTGTGCTTCTCCGTTTGGCACATCTATATGAACGAAGTGAAGATGCTGAGTATTCGACTCTAACGAAAGTTGAACTAAAGAAGTTGTTTGCCATGAAAACGATAAGGGAGTTGAAGGAGGTAAGTTTGTCATCAAACCAAGAGAAATCAGAAATGAAGAGGATGACATGGAAGGTTGAAGGGGACAAAGGACAAGAACCTCAGGCAGTTAGGGGTGGCCCTGTCAGCTATCACAATTTGGTTGTTGAGCTTGGCCCCATGGAAATACGAACTTTCCTTTTGAAATTTTAA 3039 0.4123 MGNLAAESLCALLLLCFYGKLIVSAKYMKYNTGASIVPGKLNVHLVPHSHDDVGWLKTIDQYYVGSNNSIQGACVENVLDSVVVSLQKDPNRKFVFAEMAFFHRWWVEQSPETQEQVRKLVDAGQLEFINGGWCMHDEAATHYIDMIDQTTLGHRFIKDQFNKTPTVGWQIDPFGHSAVQAYLLGAELGFDSIHFARIDYQDRAKRKADKSLEVVWRGSKTFGSSAQIFANTFPVHYSAPNGFNFEVNNPDVDVGPVQDDPLIFDYNVKQRVKEFIDAATTQANVTRTNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKDGRVNALYSTPSIYTNAKNAANQLWPLKTDDYFPYADSPNAYWTGYFTSRPALKRYVRMLSGYYLAARQLEFLVGKQSTKYNTYDLGDALGIAQHHDAVSGTAKQHTTNDYAKRLAIGAYEAEAVVSSSLACLTRKQSGDKCSTPASAFAQCQLLNISYCPPAEDNIPEAKSLVVVVYNPLGWNRTDIVKIPVNDANLVVKDSSGNKLEVQYVDVDDVTTNLRKFYVKAYVGVSPKQSPKYWLLFQVSVPPLGWSTYFISKATRKGTRRKDLSHTNSQKGDTINIGSGNLKMSFSSTSGQLKRMYNSRTGVDIPIQQSYLWYGSSEGDSDPQASGAYIFRPNGSPPNIVSRSVPTKVIRGPLVDEVHQKFSSWIYQVTRLYKDKEHAEIEFTIGPIPTDDGVGKEVITRMTANMATNKEFYADSNGRDFLKRVRDHREDWPLQVTQPVAGNYYPLNLGIYTKDEKSEFSVLVDRATGGASIKDGEVELMLHRRILHDDSRGVGEPLDEQVCVNNNNTCEGLTVRGNYYISIHKLGVGSRWRRTTGQEIYSPFLVAFTHEISENWKSSHLTKGTIMDPNYSLPPNIALITLEELDGGIVLLRLAHLYERSEDAEYSTLTKVELKKLFAMKTIRELKEVSLSSNQEKSEMKRMTWKVEGDKGQEPQAVRGGPVSYHNLVVELGPMEIRTFLLKF 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01181 1012 Pfam Glycosyl hydrolases family 38 N-terminal domain 42 356 IPR000602 GO:0004559|GO:0006013
Gma16g01181 1012 Gene3D Glycoside hydrolase family 38, central domain 325 403 IPR037094 GO:0004559|GO:0006013
Gma16g01181 1012 Gene3D - 605 870 - -
Gma16g01181 1012 Gene3D - 482 604 IPR013780 -
Gma16g01181 1012 Gene3D - 894 1012 - -
Gma16g01181 1012 SUPERFAMILY Galactose mutarotase-like 469 1012 IPR011013 GO:0003824|GO:0005975|GO:0030246
Gma16g01181 1012 PANTHER ALPHA-MANNOSIDASE 10 1012 - -
Gma16g01181 1012 SUPERFAMILY Families 57/38 glycoside transferase middle domain 361 460 IPR028995 -
Gma16g01181 1012 Pfam Alpha mannosidase middle domain 361 453 IPR015341 GO:0004559|GO:0006013
Gma16g01181 1012 Gene3D Glycoside hydrolase 38, N terminal domain 41 324 IPR027291 -
Gma16g01181 1012 Pfam Glycosyl hydrolases family 38 C-terminal domain 607 820 IPR011682 GO:0004559|GO:0006013
Gma16g01181 1012 Gene3D Glycoside hydrolase family 38, central domain 404 459 IPR037094 GO:0004559|GO:0006013
Gma16g01181 1012 PANTHER ALPHA-MANNOSIDASE 10 1012 - -
Gma16g01181 1012 SMART Alpha_mann_mid_2 361 435 IPR015341 GO:0004559|GO:0006013
Gma16g01181 1012 CDD GH38N_AMII_LAM_like 41 320 - -
Gma16g01181 1012 SUPERFAMILY Glycoside hydrolase/deacetylase 30 359 IPR011330 GO:0005975
Gma16g01181 1012 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 904 1009 IPR041147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01181 Gma-Chr16 29320401 29330697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01181 10 959 Glycoside Hydrolase AT3G26720 60.231 0.0 1209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01181 K01191 - gmx:100806748 2053.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01181 16 29320401 29330697 Gma02g00426 02 4344971 4354762 GST