Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01116 ATGTCTAGTTCTGAGAGCACAAACGCGAGAACTAGAACAGCGTCATGGTTTTCTACCCCATTCTTTGTTATCGTTCTCCCGGTGGCCGTGGCTGCGCTTCTCTACCGGCTCGAACCATTCAAGCCGGTTCTTTTGCCGGTCCAGCTGGGCCGGTCCACCGTGGCGGTTCCGGCTCGTAACGGCCACATGCAAGATGGATCGGAACGTGTGGGTGAGGGACACTTGGAGGGCCCGGAAGACTTGGCCTACGACGCTGCGGCACGTGTCGTTTATACCGGGTGTGAGGATGGGTGGATCAAGCGAGTCACGGTGAATGACTCGGTGGTTGACTCGGCGGTTGAAGATTGGGTCAACACAGGAGGAAGGCCACTTGGACTAGTTTTGAAGCCGAATGGAGAACTCATAGTTGCTGATGCGGAAAAGGGACTGCTGAGAGTGTCAAGTGAGAAGGAGATTGAGTTGCTGGTAGATGAGTTTGAGGGGTTAAAATTCAAACTCACAGATGGTGTTGATATAGCAGATGATGGTACAATTTATTTCACAGATGCATCACACAAATACCCCGTGAAGGATGCTGTGTTTGACGTCTTAGAAGGGAAGCCAAATGGAAGATTCTTCAGCTATAATCCAGCAACAAAGAAGACAACCCTGCTTGCCCAAGACCTCTACTTTGCCAATGGGGTTGCAGTTTCAGCAGATCAACAATTTGTGGTCTTCTGTGAATCTGTCTTGATGAGATGCAATAAATATTTCGTCCTGGGCCCTAAAACAGGAACCATAGAGAAGTTCTGTGACCTGCCTGGCATGCCTGATAACATTCATTATGATGGACAAGGGCACTATTTGATTGCAATGTTCACGGCCCTTTCTCCCGAATTGGAATTGGCATATAGATACCCTTTCATTAGGAAGGCTTTTGCAATGTTTACAAAGTATGTAGGGAGTCTATCTATCTCGAAGAATGGAGGAGTTCTAGTCGTGGATTTAGAAGGAAAACCAACTGCACATTATTATGATCCCAAATTAGCATTGACTAGTGCGATTAAAATTGGGAATCATATATATGCTGGTTCCATTTTCTACCCCTTTGTAACACGTTTTGATGTTGAGAAATATCCTGCTCTCCCCACAGTTTGA 1137 0.4679 MSSSESTNARTRTASWFSTPFFVIVLPVAVAALLYRLEPFKPVLLPVQLGRSTVAVPARNGHMQDGSERVGEGHLEGPEDLAYDAAARVVYTGCEDGWIKRVTVNDSVVDSAVEDWVNTGGRPLGLVLKPNGELIVADAEKGLLRVSSEKEIELLVDEFEGLKFKLTDGVDIADDGTIYFTDASHKYPVKDAVFDVLEGKPNGRFFSYNPATKKTTLLAQDLYFANGVAVSADQQFVVFCESVLMRCNKYFVLGPKTGTIEKFCDLPGMPDNIHYDGQGHYLIAMFTALSPELELAYRYPFIRKAFAMFTKYVGSLSISKNGGVLVVDLEGKPTAHYYDPKLALTSAIKIGNHIYAGSIFYPFVTRFDVEKYPALPTV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01116 378 Pfam Strictosidine synthase 168 254 IPR018119 GO:0009058|GO:0016844
Gma16g01116 378 Gene3D - 64 371 IPR011042 -
Gma16g01116 378 SUPERFAMILY Calcium-dependent phosphotriesterase 65 370 - -
Gma16g01116 378 Pfam Strictosidine synthase-like, N-terminal 66 102 - -
Gma16g01116 378 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 5-LIKE 21 368 - -
Gma16g01116 378 PANTHER STRICTOSIDINE SYNTHASE-RELATED 21 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01116 Gma-Chr16 28048495 28051889 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01116 - - gmx:100778397 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01116 16 28048495 28051889 Gma02g00386 02 4024526 4032974 GST