Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00386 ATGTCCCAGTCAAGCCATGTGGGTTCAGCTTCTTCTTCACCATATCACTCTCACTTTCAAAGCCCTACGAAGAGAAGAACAAAACAAAGGTCATGCCTTTTATCATCCTTATTTGCCATTGCTTTCATGGTAGCGTTGGTTTCGGTTCTCTACTGGCTCGGCTCATTAGGCCCGGCCCATGAGTGGAGTCGGCCCATTGGATCAGAAGTTGTGGCGGTGGGAGAGGTGTCGGGGCCCGAAGACTTGGCTTACGACAAGAGACGGCGCGTGATTTACACCGGCTGCGAGGATGGGTGGATCAAGCGAGTCACGGTGACTGACTCGGTGGCTGACACGGTGGTAAAAAACTGGGTCAACACGGGCGGAAGACCTCTTGGACTTGCTCTTGAAAAAAGTGGGGAACTCATGGTTGCGGACGCGTTTAAGGGATTGTTGAGAGTGACAAGGAAAAAGAAAGTTGAGGTACTGGCAGATGAAGTTGAGGGCTTGAAATTCAATTTAACAGATGGTGTTGATGTAGCAGAAGATGGTACCATTTATTTCACAGATGCCACATACAAACACTCTTTGGATGATTACTACAATGACATAATTGAAGGCAAGCCTCATGGTAGGTTCATGAACTATAATCCAGAAACAAAAAAGGTAACTGTGCTTGCCCGCAACCTGTACTTTCCTAATGGAGTTGTAGTCTCACATGATCAACATTTCGTGATATACTGTGAAACTATCATGAAGAGGTGTAGAAAATATTATATAGAGGGTCCTAAAAAGGGAAGAATAGGGGAATTTTGCCGCGACCTACCTGGCATGCCAGATAATATTCATTATGTTGGACAGGGACAATATTATATTGCAATGGCCACGTCCTTAACTCCTGAATGGGATTTATTACTTAGATACCCTTTCATTCAAAAAGTTGCGGCAATGGTTACAAAGTATGTACTACAACCAAAGGAGAATGGAGGAGTCCTTGTTGTGGATTTGGAAGGAAAACCAACTGCACACTATTATGATTCTGAATTATCATTAATCTCAACCACCACCACTCTTCTAATGTCTAGGTTATGGTTTTCCACACCATTCTTTGTTATCATTCTCCCCGTGGCGGTGGCTGCGCTTTTCTTCCGGCTCGAACCGTTCGATCCGGGTTTTTTGCCGGTTCAGCTGGGCCGGTCCACCGTGGCGGTTCCGGCAAGTAACGGCCACGTGCGAGTTGGATCGGAAGCTATGGGCGAGGGACACTTGGAGGGCCCCGAAGACTTGGCCTACGACGCCGCGGCACGTGTCGTCTATACTGGGTGTGAGGATGGGTGGATCAAGCGAGTCACGGTGAATGACTCGGTGCTTGACTCGGCGGTTGAAGATTGGGTCAACACAGGAGGAAGGCCACTTGGGCTAACTCTGAAGCCGAATGGTGAACTCATAGTTGCTGACGCGGAAAAGGGACTGCTGAGAGTGTCAAGTGAAAGGGAGATTGAGCTGCTGGTAGATGAGTATGAGGGCTTAAAGTTCAAACTAACAGATGGTGTTGATGTAGCAGATGATGGTACCATTTATTTCACAGATGCATCTCACAAATACCCTGTGAAAGATGCTGTGTTAGACATCTTGGAAGGGAAGCCAAATGGAAGATTCTTCAGCTATAACCCAGCAACAAAGAAGACAACCCTGCTTGCCAAAGATCTCTACTTTGCCAATGGCGTTGCAGTTTCTGCAGATCAACAATTTGTGGTCTTCTGTGAATCTGTCCTGATGATATGCGAGAAATATTACGTACAGGGCCCTAAAAAAGGAACCATAGAGAAGTTTTGTGACCTACCTGGCATGCCTGATAACATTCATTATGATGGACAAGGGCACTATTTGATTGCAATGGTCACGGCCCTTACTCCTGAATTGGAATTGGCATATAGATACCCTTTCATTAGGAAGACTTTTGCAATTGTTACAAAGTATGTAGGGAGTCTACCTATCTCGAAGAATGGAGGAGTTCTAGTCGTGGATTTAGAAGGAAAACCAACTGCACATTATTATGATCCCAAATTATCATTGACTAGTGCGATTAAAATTGGGAATCATATATATGGTGGTTCCATTTTCTACCCCTTTGTAACACGTTTTGATATTGAGAAGTACCCTGCTCTCCCCACAGTTTGA 2160 0.4551 MSQSSHVGSASSSPYHSHFQSPTKRRTKQRSCLLSSLFAIAFMVALVSVLYWLGSLGPAHEWSRPIGSEVVAVGEVSGPEDLAYDKRRRVIYTGCEDGWIKRVTVTDSVADTVVKNWVNTGGRPLGLALEKSGELMVADAFKGLLRVTRKKKVEVLADEVEGLKFNLTDGVDVAEDGTIYFTDATYKHSLDDYYNDIIEGKPHGRFMNYNPETKKVTVLARNLYFPNGVVVSHDQHFVIYCETIMKRCRKYYIEGPKKGRIGEFCRDLPGMPDNIHYVGQGQYYIAMATSLTPEWDLLLRYPFIQKVAAMVTKYVLQPKENGGVLVVDLEGKPTAHYYDSELSLISTTTTLLMSRLWFSTPFFVIILPVAVAALFFRLEPFDPGFLPVQLGRSTVAVPASNGHVRVGSEAMGEGHLEGPEDLAYDAAARVVYTGCEDGWIKRVTVNDSVLDSAVEDWVNTGGRPLGLTLKPNGELIVADAEKGLLRVSSEREIELLVDEYEGLKFKLTDGVDVADDGTIYFTDASHKYPVKDAVLDILEGKPNGRFFSYNPATKKTTLLAKDLYFANGVAVSADQQFVVFCESVLMICEKYYVQGPKKGTIEKFCDLPGMPDNIHYDGQGHYLIAMVTALTPELELAYRYPFIRKTFAIVTKYVGSLPISKNGGVLVVDLEGKPTAHYYDPKLSLTSAIKIGNHIYGGSIFYPFVTRFDIEKYPALPTV 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00386 719 Pfam Strictosidine synthase 509 595 IPR018119 GO:0009058|GO:0016844
Gma02g00386 719 Pfam Strictosidine synthase 169 255 IPR018119 GO:0009058|GO:0016844
Gma02g00386 719 SUPERFAMILY Calcium-dependent phosphotriesterase 57 362 - -
Gma02g00386 719 Gene3D - 404 677 IPR011042 -
Gma02g00386 719 Gene3D - 62 343 IPR011042 -
Gma02g00386 719 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 4-RELATED 362 703 - -
Gma02g00386 719 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 4-RELATED 37 350 - -
Gma02g00386 719 Pfam Strictosidine synthase-like, N-terminal 409 443 - -
Gma02g00386 719 Pfam Strictosidine synthase-like, N-terminal 69 103 - -
Gma02g00386 719 SUPERFAMILY Calcium-dependent phosphotriesterase 407 710 - -
Gma02g00386 719 MobiDBLite consensus disorder prediction 1 23 - -
Gma02g00386 719 PANTHER STRICTOSIDINE SYNTHASE-RELATED 362 703 - -
Gma02g00386 719 PANTHER STRICTOSIDINE SYNTHASE-RELATED 37 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00386 Gma-Chr2 4024526 4032974 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00386 - - gmx:100813217 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00386 02 4024526 4032974 Gma02g00386 02 4024526 4032974 ECH
Gma16g01116 16 28048495 28051889 Gma02g00386 02 4024526 4032974 GST