Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01115 ATGGCTCGAAGATCCCTCCCGCTCCTGAAGCACCTCCTCTCGCGGCGGATCCCGGCCCGATCCGTGACGTACATGCACCGGCCGGGCGATGGGTCGCCGCGGCCGGTGACACTGATCCCGGGCGACGGGATCGGGCCGATGGTGACTGGCGCGGTGGAGCAGGTCATGGAGGCCATGCACGCGCCCGTCTACTTCGAGAAGTTCGAGGTCCACGGCAACATGAAGGCCGTGCCGCCGGAGGTCCTCGATTCGATTCGGAAGAACAAGGTCTGTCTCAAGGGAGGACTCGTTACCCCCATGGGCGGTGGCGTCAGCTCCCTCAATGTTCAGCTCCGGAAAGAGCTTGATCTCTATGCTTCTCTTGTTAATTGTTTCAATCTCCCTGGCCTTCCCACGCGCCATGATAATGTGGATATCGTTGTCATCAGGGAGAACACCGAAGGCGAATACTCTGGCCTCGAACACGAGGTCGTTCCCGGCGTTGTTGAAAGCCTTAAGGTAATAACGAAGTTCTGTTCAGAGCGAATTGCTAAATATGCATTCGAGTATGCTTACCTGAATAACAGAAAGAAGGTGACTGCCGTGCACAAAGCAAATATTATGAAGCTTGCAGATGGTTTATTCTTGGAATCTTGTCGAGAGGTTGCTACAAAGTACCCTGGAATAAAGTATAACGAAATTATTGTGGATAACTGCTGTATGCAGCTTGTTTCAAAGCCTGAACAGTTTGATGTCATGGTTACCCCAAATCTTTATGGAAATCTAGTTGCAAATACTGCAGCAGGCATTGCTGGAGGCACTGGAGTCATGCCAGGAGGTAACGTTGGGGCTGAGCACGCTGTGTTTGAGCAAGGTGCGTCAGCAGGAAATGTTGGTAGTGATAAAATAAGGGAACAAAAGAAAGCCAATCCAGTGGCCCTTCTTCTCTCGTCAGCTATGATGCTTAGGCATCTCCAGTTTCCTGCATTTGCTGACCGTTTGGAAACTGCTGTGGAAAAAGTCATTTTGGAGGGCAAATGCCGAACAAAGGATCTTGGAGGGACAAGCACCACCCAAGAGGTTGTGGATGCAGTGATAGATGCTTTAGATTGA 1092 0.5128 MARRSLPLLKHLLSRRIPARSVTYMHRPGDGSPRPVTLIPGDGIGPMVTGAVEQVMEAMHAPVYFEKFEVHGNMKAVPPEVLDSIRKNKVCLKGGLVTPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHDNVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEHAVFEQGASAGNVGSDKIREQKKANPVALLLSSAMMLRHLQFPAFADRLETAVEKVILEGKCRTKDLGGTSTTQEVVDAVIDALD 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01115 363 Pfam Isocitrate/isopropylmalate dehydrogenase 36 358 IPR024084 -
Gma16g01115 363 Gene3D Isopropylmalate Dehydrogenase 18 362 - -
Gma16g01115 363 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 34 362 - -
Gma16g01115 363 PANTHER NAD-DEPENDENT ISOCITRATE DEHYDROGENASE C,1 19 360 - -
Gma16g01115 363 SMART Iso_dh_2 35 358 IPR024084 -
Gma16g01115 363 TIGRFAM mito_nad_idh: isocitrate dehydrogenase, NAD-dependent 33 361 IPR004434 GO:0006099
Gma16g01115 363 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 19 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01115 Gma-Chr16 28021464 28024952 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01115 K00030 - gmx:100777867 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01115 16 28021464 28024952 Gma02g00384 02 4007862 4012492 GST
Gma11g00766 11 6405229 6409402 Gma16g01115 16 28021464 28024952 PCT
Gma16g01115 16 28021464 28024952 Gma11g00766 11 6405229 6409402 PCT