Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00384 ATGGCACGAAGATCCCTCCCTCTCCTAAAGCACCTCCTCCTCTCGCGGCGGATCCCGGCCCGATCCGTGACGTACATGCACCGGCCGGGCGACGGGTCTCCTCGGCCTGTGACGCTGATCCCTGGCGACGGGATCGGGCCGATGGTGACGGGCGCGGTGGAGCAGGTCATGGAGGCCATGCATGCGCCCGTCTACTTTGAGAAGTTCGAGGTCCACGGCCACATGAAGGCCGTGCCGCCGGAGGTCCTCGATTCGATTCGGAAGAACAAGGTCTGTCTCAAGGGTGGACTCGTCACCCCCATGGGTGGTGGCGTCAGTTCCCTCAATGTTCAGCTTCGGAAGGAGCTTGATCTCTATGCTTCTCTTGTTAATTGTTTCAACCTCCCTGGCCTTCCCACGCGCCATGATAATGTTGATATTGTTGTCATCAGGGAGAACACCGAAGGCGAGTACTCCGGCCTCGAACACGAGGTCGTTCCCGGCGTTGTTGAAAGCCTTAAGGTAATAACAAAGTTTTGTTCAGAGCGAATTGCTAAATATGCATTCGAGTATGCTTACCTGAATAACAGAAAGAAGGTGACTGCCGTGCACAAAGCAAATATTATGAAGCTtgctgatggtttattcttggaatcttgtcgagaggttgctacaaagtaccctggaatcaagtataacgaaattattgtggataactgctgtatgcagcttgtttcaaagcctgaacagtttgatgtcatgGTGACCCCAAATCTTTATGGAAATCTAGTTGCAAACACTGCAGCAGGCATTGCTGGAGGCACTGGAGTCATGCCAGGAGGTAATGTTGGGGCTGAGCACGCTGTGTTTGAGCAAGGTGCATCAGCGGGAAATGTCGGTAGTGATAAAATAAGGGAACAAAAGAAAGCCAATCCAGTGGCGCTTCTTCTCTCGTCAGCTATGATGCTTAGGCATCTCCAGTTTCCTGCATTTGCTGACCGTTTGGAAACTGCTGTGGAAAAAGTCATCCTGGAGGGCAAATGCCGAACAAAGGATCTTGGAGGGACAAGCACCACCCAAGAGGTTGTGGATGCAGTGATAGATGCTTTAGATTGA 1095 0.4658 MARRSLPLLKHLLLSRRIPARSVTYMHRPGDGSPRPVTLIPGDGIGPMVTGAVEQVMEAMHAPVYFEKFEVHGHMKAVPPEVLDSIRKNKVCLKGGLVTPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHDNVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEHAVFEQGASAGNVGSDKIREQKKANPVALLLSSAMMLRHLQFPAFADRLETAVEKVILEGKCRTKDLGGTSTTQEVVDAVIDALD 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00384 364 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 20 361 - -
Gma02g00384 364 PANTHER NAD-DEPENDENT ISOCITRATE DEHYDROGENASE C,1 20 361 - -
Gma02g00384 364 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 35 363 - -
Gma02g00384 364 SMART Iso_dh_2 36 359 IPR024084 -
Gma02g00384 364 Pfam Isocitrate/isopropylmalate dehydrogenase 37 359 IPR024084 -
Gma02g00384 364 Gene3D Isopropylmalate Dehydrogenase 19 363 - -
Gma02g00384 364 TIGRFAM mito_nad_idh: isocitrate dehydrogenase, NAD-dependent 34 362 IPR004434 GO:0006099
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00384 Gma-Chr2 4007862 4012492 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00384 K00030 - gmx:100800050 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00384 02 4007862 4012492 Gma02g00384 02 4007862 4012492 ECH
Gma16g01115 16 28021464 28024952 Gma02g00384 02 4007862 4012492 GST
Gma11g00766 11 6405229 6409402 Gma02g00384 02 4007862 4012492 PCT
Gma02g00384 02 4007862 4012492 Gma11g00766 11 6405229 6409402 PCT