Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01053 ATGAGAATTTTCCCAAACACGTTCTTCACCAAAGCCCGcAATCTCATAGGCCTCGGGTTCGCTTCCTCGACCGCCGCCACCATCGCGGCCTCCACTTCCGCCGCGTCTTCTTCTCCATCATCCACCTCTTCTTCCGACGCCGGCGATACTTCTTCCTCCTATTCTTCCTCCTCCGAAGCCCAAATCGTCCACCGGAAAATACTGAAAACGAAGCTCTGCATCATCGGAAGCGGGCCGGCGGCGCACACCGCCGCCATATACGCGGCGCGCGCCGAGTTGAAGCCGGTCCTCTTTGAAGGCTGGATGGCGAACGGCGTCGCTCCCGGTGGCCAGCTCACCACCACCACCGACGTCGAGAACTTCCCGGGATTTCCCGCCGGCATCCTCGGCACCGACCTCATGGACCGCTGCCGCCAGCAGTCGCAACGCTTCGGTGCCGAGGTAGTCACGGAGACCGTCACCGCCGTCGACCTCTCCCAACGTCCGTTTAGGGTTTACTCCGACTCCACCACCGTGGAGGCCGAATCCGTGGTGGTCGCCACCGGCGCTGTGGCGAAACGGCTTAATTTCGATGGCGCCGGTGACACCCCTGACGGGTTCTGGAACCGCGGCATATCCGCGTGCGCTGTGTGCGACGGCGCCGCCCCAATATTCCGCGGCAAACCGCTGGTGGTGATCGGCGGCGGCGATTCGGCGATGGAGGAAGCTACCTTCCTCTCCAAGTTTGGCTCCAAGGTGTACATAATTCATAGGAGGGACAAGTTTAGGGCTTCTAAAGTCATGCAGGGAAAGGTGATGAGTAATCCCAAAATTGAGGTGTTGTGGAATTCAGTGGTGGTTGGGGCTCATGGGGATGATAAGGGTAGGATTCTTGGAGGGGTTAAGGTGAAGAATGTGGTGACTGGGGCTGTGTCTGATTTGAAGGTTTCTGGATTGTTCTTTGCAATTGGGCATGAGCCTGCCACAAAGTTCTTGGATGGTCAACTTGAATTGGACTCTGATGGGTACATTGTGACCAAACCTGGCACCACAAAGACTAGTGTTGATGGAGTTTTTGCTGCTGGTGATGTTCAAGATAAAAAGTATAGGCAAGCTATTACAGCTGCTGGCACTGGGTGTATGGCAGCCTTGGATGCAGAACATTACTTGCAAGGGATTGGTTTGCAGGAGGGTAAGAGTGTTTGA 1185 0.562 MRIFPNTFFTKARNLIGLGFASSTAATIAASTSAASSSPSSTSSSDAGDTSSSYSSSSEAQIVHRKILKTKLCIIGSGPAAHTAAIYAARAELKPVLFEGWMANGVAPGGQLTTTTDVENFPGFPAGILGTDLMDRCRQQSQRFGAEVVTETVTAVDLSQRPFRVYSDSTTVEAESVVVATGAVAKRLNFDGAGDTPDGFWNRGISACAVCDGAAPIFRGKPLVVIGGGDSAMEEATFLSKFGSKVYIIHRRDKFRASKVMQGKVMSNPKIEVLWNSVVVGAHGDDKGRILGGVKVKNVVTGAVSDLKVSGLFFAIGHEPATKFLDGQLELDSDGYIVTKPGTTKTSVDGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLQGIGLQEGKSV 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01053 394 SUPERFAMILY FAD/NAD(P)-binding domain 69 383 IPR036188 -
Gma16g01053 394 PRINTS FAD-dependent pyridine nucleotide reductase signature 72 91 - -
Gma16g01053 394 PRINTS FAD-dependent pyridine nucleotide reductase signature 174 192 - -
Gma16g01053 394 PRINTS FAD-dependent pyridine nucleotide reductase signature 222 240 - -
Gma16g01053 394 PRINTS FAD-dependent pyridine nucleotide reductase signature 309 325 - -
Gma16g01053 394 PRINTS FAD-dependent pyridine nucleotide reductase signature 336 358 - -
Gma16g01053 394 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 69 390 - -
Gma16g01053 394 PRINTS Pyridine nucleotide disulphide reductase class-II signature 71 93 - -
Gma16g01053 394 PRINTS Pyridine nucleotide disulphide reductase class-II signature 109 124 - -
Gma16g01053 394 PRINTS Pyridine nucleotide disulphide reductase class-II signature 130 140 - -
Gma16g01053 394 PRINTS Pyridine nucleotide disulphide reductase class-II signature 175 183 - -
Gma16g01053 394 PRINTS Pyridine nucleotide disulphide reductase class-II signature 201 213 - -
Gma16g01053 394 PRINTS Pyridine nucleotide disulphide reductase class-II signature 218 242 - -
Gma16g01053 394 PRINTS Pyridine nucleotide disulphide reductase class-II signature 270 286 - -
Gma16g01053 394 PRINTS Pyridine nucleotide disulphide reductase class-II signature 311 332 - -
Gma16g01053 394 PRINTS Pyridine nucleotide disulphide reductase class-II signature 346 364 - -
Gma16g01053 394 Gene3D - 74 382 IPR036188 -
Gma16g01053 394 MobiDBLite consensus disorder prediction 34 55 - -
Gma16g01053 394 Gene3D - 190 321 IPR036188 -
Gma16g01053 394 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 208 230 IPR008255 GO:0016491
Gma16g01053 394 PANTHER THIOREDOXIN REDUCTASE 69 390 - -
Gma16g01053 394 TIGRFAM TRX_reduct: thioredoxin-disulfide reductase 71 383 IPR005982 GO:0004791|GO:0005737|GO:0019430
Gma16g01053 394 Pfam Pyridine nucleotide-disulphide oxidoreductase 71 371 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01053 Gma-Chr16 26604394 26607321 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01053 K00384 - gmx:100794363 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01053 16 26604394 26607321 Gma16g01053 16 26604394 26607321 ECH
Gma01g01603 01 51663093 51667975 Gma16g01053 16 26604394 26607321 PCT
Gma11g00807 11 6761961 6766422 Gma16g01053 16 26604394 26607321 PCT
Gma16g01053 16 26604394 26607321 Gma01g01603 01 51663093 51667975 PCT
Gma16g01053 16 26604394 26607321 Gma11g00807 11 6761961 6766422 PCT