Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01603 ATGAAATTTAGAATCTGCCCTAATCATCATAACTGGAAGAACCTCTTATCGAAGGCGCGAAACTTGATCAGTGTTGGACGCGCTTCCTCCGCCGCCGTCGCCAACGCCATGGGTGACGTTCAGATCCACAAGACCAAACTCTGCATCATCGGAAGCGGCCCCGCCGCCCATACCGCCGCCGTCTACGCCGCCCGTGCGGAGCTGAAGCCTATCCTCTTCGAGGGCTGGATGGCCAACGACATTGCCCCCGGCGGCCAGCTCACCACCACCACTGACGTCGAGAACTTCCCCGGCTTCCCCGACGGCATCCTCGGCGGCGAGCTCATGGACCGCTGCcGGAGCCAGTCCCTCCGCTTCGGCACCGAGATCCACACCGAGACCGTCTCCAAGGTCGATTTCTCCGCCCGTCCTTTTAGGGTTTTCACCGATTCCCGCACCGTCGAGGCCGAATCCGTCATCGTCGCCACCGGCGCCGTCGCCAAGCGCCTCCCCTTCCCCGGCTCCGGCGATGGCCCCGATGGCTACTGGAACCGTGGCATCTCCGCGTGCGCCGTCTGCGATGGCGCCGCGCCGATCTTCCGGAACAAGCCACTGGCGGTGATCGGCGGCGGGGACTCGGCGATGGAGGAGGCCACCTTTCTCACCAAGTACGGTTCCGAGGTTTACATAATTCACCGCAGGGATACATTCAGGGCTTCGAAGATTATGCAGAGCAAGGTTATGGGCAATAGCAAGATTAAGGTGATTTGGAATTCGGTGGTGGTTGAGGCTTTTGGGGGCGGAGATAACAAGAGGGTGCTTGGGGGATTGAAGGTGAAGAATGTGGTGACTCGAGAGGTATCTGAATTGAAGGTTTCTGGGTTGTTTTTCGCAATTGGGCACGAGCCCGCAACCAAGTTCTTGGACGGGCAGCTTGAATTGGATTCTGATGGATATATTGTGACGAAGCCGGGGACGACGAAGACCAGTGTTGAGGGAGTGTTTGCTGCTGGGGATGTTCAGGACAAGAAGTATAGGCAAGCTATTACTGCTGCTGGCACTGGATGCATGGCAGCTTTGGATGCAGAACATTACCTACAAAATGTTGGTTTACAACAAGATAAGAGTGATTGA 1113 0.5714 MKFRICPNHHNWKNLLSKARNLISVGRASSAAVANAMGDVQIHKTKLCIIGSGPAAHTAAVYAARAELKPILFEGWMANDIAPGGQLTTTTDVENFPGFPDGILGGELMDRCRSQSLRFGTEIHTETVSKVDFSARPFRVFTDSRTVEAESVIVATGAVAKRLPFPGSGDGPDGYWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEATFLTKYGSEVYIIHRRDTFRASKIMQSKVMGNSKIKVIWNSVVVEAFGGGDNKRVLGGLKVKNVVTREVSELKVSGLFFAIGHEPATKFLDGQLELDSDGYIVTKPGTTKTSVEGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLQNVGLQQDKSD 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01603 370 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 183 205 IPR008255 GO:0016491
Gma01g01603 370 Gene3D - 49 358 IPR036188 -
Gma01g01603 370 TIGRFAM TRX_reduct: thioredoxin-disulfide reductase 46 359 IPR005982 GO:0004791|GO:0005737|GO:0019430
Gma01g01603 370 PRINTS FAD-dependent pyridine nucleotide reductase signature 47 66 - -
Gma01g01603 370 PRINTS FAD-dependent pyridine nucleotide reductase signature 149 167 - -
Gma01g01603 370 PRINTS FAD-dependent pyridine nucleotide reductase signature 197 215 - -
Gma01g01603 370 PRINTS FAD-dependent pyridine nucleotide reductase signature 285 301 - -
Gma01g01603 370 PRINTS FAD-dependent pyridine nucleotide reductase signature 312 334 - -
Gma01g01603 370 PRINTS Pyridine nucleotide disulphide reductase class-II signature 46 68 - -
Gma01g01603 370 PRINTS Pyridine nucleotide disulphide reductase class-II signature 84 99 - -
Gma01g01603 370 PRINTS Pyridine nucleotide disulphide reductase class-II signature 105 115 - -
Gma01g01603 370 PRINTS Pyridine nucleotide disulphide reductase class-II signature 150 158 - -
Gma01g01603 370 PRINTS Pyridine nucleotide disulphide reductase class-II signature 176 188 - -
Gma01g01603 370 PRINTS Pyridine nucleotide disulphide reductase class-II signature 193 217 - -
Gma01g01603 370 PRINTS Pyridine nucleotide disulphide reductase class-II signature 245 261 - -
Gma01g01603 370 PRINTS Pyridine nucleotide disulphide reductase class-II signature 287 308 - -
Gma01g01603 370 PRINTS Pyridine nucleotide disulphide reductase class-II signature 322 340 - -
Gma01g01603 370 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 42 366 - -
Gma01g01603 370 Pfam Pyridine nucleotide-disulphide oxidoreductase 46 347 IPR023753 GO:0016491
Gma01g01603 370 SUPERFAMILY FAD/NAD(P)-binding domain 43 359 IPR036188 -
Gma01g01603 370 PANTHER THIOREDOXIN REDUCTASE 42 366 - -
Gma01g01603 370 Gene3D - 165 297 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01603 Gma-Chr1 51663093 51667975 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01603 K00384 - gmx:100786086 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01603 01 51663093 51667975 Gma01g01603 01 51663093 51667975 ECH
Gma01g01603 01 51663093 51667975 Gma11g00807 11 6761961 6766422 GST
Gma01g01603 01 51663093 51667975 Gma16g01053 16 26604394 26607321 PCT
Gma16g01053 16 26604394 26607321 Gma01g01603 01 51663093 51667975 PCT