Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00999 ATGAACAGAAAAAGCATGGAGAGCAATGGGGAGAGCCATAGCAGAAGTGGTAGCTTCAGGGTGGGGTTCGGGTTGGGTCCGAATGAGGCAAAAGTTCACACTGTGGTTGAGCTTGGTAGTGTTGATTATACGCACACTACTACCACTTGTCTTCTTCTAGATGATGATGATGATGTTGGTGAGGAGAGAGAGAAAGAGCAGAAAAAACCTCTTACAAACTCTCTCTCTCCTAGGCAGATGAAGTCCCTTGTTGCTCTCTGTGACACCCTATTACCTTCCATCAACAACAACAGCAACAACGTTTGTGGCTCGGATGATGATGAATCTGTTGCCAACTTCTATAAGACTTCGGCTTCGATGGCTGGAACACCTGAGCATCTTGGGATATTGATTAGTGAGAAACTGAGGCACCCAAGTACATGGCTCTTGTtgctgtcattatggctgctgtccacatggtttggcacattcatactgtgtggcatgttgagcctctcaacaaAGTTTCCCTTCTTCCATAGCTACCCTGAGTTGTCTCTTCTTAAACAGCAAAAAGTGATGCAGTCTTGGTCTCTCAGTTACCTTCGACCTCTTAGGATGTTGTTCAGAACTATCAAGCTTCTCACTCTCCTTGTCTTCTTCACTCAGCTAGATGAAGCAGAAGACAACCCATCATGGAAGGCAATTAACTATTGTGGACCTGATCCAGAGTTCAAATCACAGTTGAAGAACCACTTCTTTACAAAGGAAAGAGGACAAGAGGAAAAAGAAGATGAAGACTATGATGATGGTACTGAAGATGTTAGAGGGCCTCTTTACAAAGGTCTTATATACATAAATTACCCACGAGACATCATCACAGATTCTCTAAGACGAGTTGGATTCTCTGTCTCTGCTACTCCCAAAAAGACTAAGGCTTCTAGCCTCTCATCTCCTTCTTTGGTTATCCAATGTGATGCTGTGGTTGTTGGTTCTGGCTCTGGAGGAGGGGTAGTGGCTGGGGTTCTAGCAAATGCTGGTTATAAAGTGCTGGTGTTGGAGAAAGGAAGTTATTCTGCTAGGAACAATCTTTCCCTTCTTGAAGGACCAAGCATGGACCAAATGTACCTCTCCAATGGTTTGGTTGCCACAAAGGATATGTCTGTGCTAATACTAGCAGGTTCCACAGTTGGTGGAGGGTCTGCAATCAACTGGTCAGCCAGCATCAGAACTCCTCAACATGTGTGCAAGGAGTGGTGTGACGGCCACGAGCTCGAATTGTTTGAGAGTAAGTTGTACAAAGAAGCCTTGGATGTTGTGTGTGAGAAAATGGGAGTGCAATCTGAGATTGATGATGAAGGATTCAACAATGCTGTTTTAAGAAGAGGGTGTCTAGAAATGGGGTATCCAGTGTGCGATATTCCTAGGAATGCTTCGTCGGATCACTACTGTGGCTGGTGTTGTATGGGGTGCAAGGATGGAAGGAAGAAAGGTACACTAGAAACATGGCTAGTGGACTTGGTGAAATCAGGTAATGGTGCAATCATTCCGAGTTGTGAGGCTATTCAAGTGTTGCATAAGAAAAAGAAAGGAAGAGACAGAAAAATAGCAAGGGGAGTGGCTTTTGCAATTGAATACAAGGGGAAAAGGGACATTTGTGTAGTAGAGTCAAAGGTCACAGTTGTAGCTTGCGGAGCACTTAGTACTCCAGCATTGCTTAAAAGAAGTGGATTGAAGAATGAAAACATAGGGAGAAACTTGCACCTTCATCCAGTGGCAATGGCTTGGGGATACTTCCCTGATTCACTTTCACCTGAGTTGTGGCCAGAGAAGCATAAAAAGAGCTATGAAGGAGGGATTATGACGGCAATGTCCACAGTTGTTGCACAGTTTGACAAATCTGGATATGGTGCAGTGATCCAGACACCTGCATTGCATCCTGGTATGTTCTCAATTCTAATGCCATGGACTTCTGGCAAGGATATAAAAGATCGAATGCGCAAGTTTTCTAGAACGGCTCACGTGTTTGCACTGGCAAGGGATCAAGGATCAGGAACTGTGAATTCGCCTTCCCATATAAGTTATCAGTTGAAAGACGTCGACAAAGAGAATCTAAAGATTGGACTTGAGAAGGTACTGAGGATTCTTGCAGCAGCTGGAGCTGAAGAAATTGGGACCCATAACAACAAGGGAAGGAGCATAAATGTGAAGCAGGTGAGCTATCATGAGTTTGAGAAATTTGTGAAAGAAGAAAGTTCAATGTCTTTGACAGACATTTCTACACCATTGTGTTCAGCACATCAAATGGGAAGCTGCAAGATGGGTACCAACCCAAGGGAATCAGTTGTGAACCAAATGGGGGAGACATGGGAAGTGGAGGGCCTTTATTTGGCAGACACAAGTGTCTTTCCCACTGCTTTGGGTGTGAATCCGATGGTCACTGTTCAGGCTATTTCTTACTGCACAGCACAATATGTTCTTGAAGTTCTTAGAAGGAAAAGAAAGTGA 2487 0.429 MNRKSMESNGESHSRSGSFRVGFGLGPNEAKVHTVVELGSVDYTHTTTTCLLLDDDDDVGEEREKEQKKPLTNSLSPRQMKSLVALCDTLLPSINNNSNNVCGSDDDESVANFYKTSASMAGTPEHLGILISEKLRHPSTWLLLLSLWLLSTWFGTFILCGMLSLSTKFPFFHSYPELSLLKQQKVMQSWSLSYLRPLRMLFRTIKLLTLLVFFTQLDEAEDNPSWKAINYCGPDPEFKSQLKNHFFTKERGQEEKEDEDYDDGTEDVRGPLYKGLIYINYPRDIITDSLRRVGFSVSATPKKTKASSLSSPSLVIQCDAVVVGSGSGGGVVAGVLANAGYKVLVLEKGSYSARNNLSLLEGPSMDQMYLSNGLVATKDMSVLILAGSTVGGGSAINWSASIRTPQHVCKEWCDGHELELFESKLYKEALDVVCEKMGVQSEIDDEGFNNAVLRRGCLEMGYPVCDIPRNASSDHYCGWCCMGCKDGRKKGTLETWLVDLVKSGNGAIIPSCEAIQVLHKKKKGRDRKIARGVAFAIEYKGKRDICVVESKVTVVACGALSTPALLKRSGLKNENIGRNLHLHPVAMAWGYFPDSLSPELWPEKHKKSYEGGIMTAMSTVVAQFDKSGYGAVIQTPALHPGMFSILMPWTSGKDIKDRMRKFSRTAHVFALARDQGSGTVNSPSHISYQLKDVDKENLKIGLEKVLRILAAAGAEEIGTHNNKGRSINVKQVSYHEFEKFVKEESSMSLTDISTPLCSAHQMGSCKMGTNPRESVVNQMGETWEVEGLYLADTSVFPTALGVNPMVTVQAISYCTAQYVLEVLRRKRK 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00999 828 PIRSF Lg_Ch_AO 61 828 IPR012400 GO:0046577
Gma16g00999 828 Pfam GMC oxidoreductase 685 813 IPR007867 GO:0016614
Gma16g00999 828 MobiDBLite consensus disorder prediction 1 20 - -
Gma16g00999 828 Gene3D - 745 826 IPR036188 -
Gma16g00999 828 SUPERFAMILY FAD/NAD(P)-binding domain 316 821 IPR036188 -
Gma16g00999 828 MobiDBLite consensus disorder prediction 55 74 - -
Gma16g00999 828 Pfam GMC oxidoreductase 319 585 IPR000172 GO:0016614|GO:0050660
Gma16g00999 828 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO1-LIKE PROTEIN 38 827 - -
Gma16g00999 828 Gene3D - 303 628 IPR036188 -
Gma16g00999 828 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 38 827 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00999 Gma-Chr16 24348491 24361991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00999 56 823 Acyl Lipid Metabolism Gene Families AT4G19380 57.792 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00999 K17756 - gmx:100778575 1622.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01570 01 51251062 51260043 Gma16g00999 16 24348491 24361991 PCT
Gma09g02028 09 45862424 45870448 Gma16g00999 16 24348491 24361991 PCT
Gma16g00999 16 24348491 24361991 Gma01g01570 01 51251062 51260043 PCT
Gma16g00999 16 24348491 24361991 Gma09g02028 09 45862424 45870448 PCT